| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0205 |
|---|
| Symbol | |
|---|
| ID | 4923212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 218094 |
|---|
| End bp | 219317 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640161728 |
|---|
| Product | argininosuccinate synthase |
|---|
| Protein accession | YP_001092336 |
|---|
| Protein GI | 127511139 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0137] Argininosuccinate synthase |
|---|
| TIGRFAM ID | [TIGR00032] argininosuccinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0718658 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTATCG AAAACAACAA AGCATCGGTG AAAAAAGTGG TATTGGCCTA CTCGGGTGGT
CTGGATACAT CGGCGATCAT TCCTTGGCTG AAAGAGACCT ATGATAATTG TGAGATCGTT
GCCTTCTGCG CCGACGTGGG TCAGGGCGAG GCCGAGCTTG AAGGGCTGCA TGAGAAGGCG
ATCGCCTCGG GTGCGTCTGA GTGCTATATC GTGGATCTGA AAGAGGAGCT GGTGGCCGAT
TATATCTACC CCACCATAGC GACAGGTGCC ATCTACGAAG GCACCTACCT GCTGGGCACC
TCTATGGCCA GACCTATCAT CGCCAAGGCT CAGGTGGAAG TGGCACGTAA AGTGGGCGCC
GACGCCGTAT GTCACGGTTG TACCGGCAAG GGTAACGATC AGGTGCGTTT CGAGGGCTGT
TTCGCCGCCC TGGCACCGGA TCTTACCGTG ATCGCCCCTT GGCGTGAGTG GAGCATGGTG
AGCCGTGAAG ATCTGCTGGA CTATCTGGCA GAGCGCAACA TCAAGACTAC TGCCTCTGCC
ACTAAGATCT ATAGCCGTGA CGCCAACGCC TGGCACATCT CTCACGAAGG TGGTGAGCTG
GAAGATCCGT GGAACGAGCC AAGCAAAGAA GTATGGACCA TGACGGTTGC GCCGGAAGAT
GCGCCCGATG AGCCTGAGTA TGTGTCGGTT GAGATGGAAG CCGGTCGTAT CACTAAGGTG
AATGGTCAGT CATACACTCC TTATGGTGCC CTGATGGCCC TTAACGAGAT TGCCGGCGCC
CATGGCGTGG GTCGTATCGA TATCACCGAA AACCGTCTGG TGGGCATGAA GTCTCGTGGC
TGCTACGAAA CTCCTGGTGG CACGGTAATG TTCGCCGCGC TCAGAGCGAT CGAAGAGCTG
GTACTGGACA AGACCAGCCG CGAATGGCGT GAGCAGGTAG GTGCCAAGAT GGCGCACCTG
GTCTATGACG GTCGTTGGTT TACCCCATTG TGTGAATCGC TGCTGGGCGC CTCTCAGCCA
CTGGCGAACC TGCTGAACGG TGAAGTGGTG CTGAAGCTCT ATAAGGGCCA GGCACAGGCG
GTGAAGAAAC GTTCTCCTAA TAGCCTGTAC TCCGAGGAGT TTGCTACCTT TGGTGAAGAC
GAAGTCTATA ACCAGAAAGA TGCGGAAGGC TTCATTCGTC TCTATTCATT GGCGAGCCGT
ATCCGGGCGC TAAACGTTAA GTAG
|
|---|
| Protein sequence | MSIENNKASV KKVVLAYSGG LDTSAIIPWL KETYDNCEIV AFCADVGQGE AELEGLHEKA
IASGASECYI VDLKEELVAD YIYPTIATGA IYEGTYLLGT SMARPIIAKA QVEVARKVGA
DAVCHGCTGK GNDQVRFEGC FAALAPDLTV IAPWREWSMV SREDLLDYLA ERNIKTTASA
TKIYSRDANA WHISHEGGEL EDPWNEPSKE VWTMTVAPED APDEPEYVSV EMEAGRITKV
NGQSYTPYGA LMALNEIAGA HGVGRIDITE NRLVGMKSRG CYETPGGTVM FAALRAIEEL
VLDKTSREWR EQVGAKMAHL VYDGRWFTPL CESLLGASQP LANLLNGEVV LKLYKGQAQA
VKKRSPNSLY SEEFATFGED EVYNQKDAEG FIRLYSLASR IRALNVK
|
|---|
| |