| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0204 |
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| Symbol | |
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| ID | 4923062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 217135 |
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| End bp | 218040 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640161727 |
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| Product | ornithine carbamoyltransferase |
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| Protein accession | YP_001092335 |
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| Protein GI | 127511138 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0078] Ornithine carbamoyltransferase |
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| TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0726864 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCACC TACTATCGAT AAAAGAGCTT ACCCAGCAGC AGCTGATCGA CTTACTCGCC
CTGGCGAAGA CGATCAAGGC CAACCCAGAA GACTATCGCA AGGCACTCGA CGGTAAGAGT
GTGGTGATGT TATTCGAGAA GCCATCGCTG CGAACTCGCG TAAGCTTCGA CATCGGTATC
AATAAGTTAG GTGGTCATTG TCTCTACCTG GATCAGCAAA ATGGTGCCCT GGGCAAGCGT
GAGCCGGTAT CCGACTTTGC CGCCAACATC TCTTGTTGGG CCGATGCCAT AGTGGCGAGA
ACCTTCGCCC ATTCGACCAT AGAGCAGCTC GCCGAGCATG GCACTGTGCC TGTGATCAAC
GCGCTGTCGG ACATGTACCA TCCTTGTCAG GGGCTGGCTG ATTTTCTGAC CCTGGCGGAG
CAGTTCGATG ATGTCAGCAA GGTAAAGCTG GCCTATGTTG GCGATGGTAA CAACGTGACC
CACTCGCTCA TGTATGGCGC GGCGCTGCTG GGTGCCAAGA TGACGGTGAT CTGCCCGCAG
GGCCACTTCC CCGACGGTAA GGTGGTGCTC GAGGCACAAG CGATTGCCGA GGCCCATGGT
GGCGAGTTGG TATTGAGCTC AGATGTCGAG GCGATCGCCG GCCATGATGC CATCTATACT
GATACTTGGA TCTCCATGGG AGACAAGGCC AGTCTAGATG AGATCAAAGC CAAATTTGCG
CCTTATCATG TAGATACCGA TATGATGAAC AAGGCGGGAG CCAAATTCTT TATGCACTGC
CTACCTGCTT ACCGTGGCGT TGAGGTGGCT GCCGAGGTGG TCGATGGGGC CGGCTCACTG
ATCTTGCAAC AGGCAGAGAA CCGCATGCAT GCGCAGAATG CCGTGTTGGT GACCCTACTG
AGTTAA
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| Protein sequence | MNHLLSIKEL TQQQLIDLLA LAKTIKANPE DYRKALDGKS VVMLFEKPSL RTRVSFDIGI
NKLGGHCLYL DQQNGALGKR EPVSDFAANI SCWADAIVAR TFAHSTIEQL AEHGTVPVIN
ALSDMYHPCQ GLADFLTLAE QFDDVSKVKL AYVGDGNNVT HSLMYGAALL GAKMTVICPQ
GHFPDGKVVL EAQAIAEAHG GELVLSSDVE AIAGHDAIYT DTWISMGDKA SLDEIKAKFA
PYHVDTDMMN KAGAKFFMHC LPAYRGVEVA AEVVDGAGSL ILQQAENRMH AQNAVLVTLL
S
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