| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0202 |
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| Symbol | argC |
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| ID | 4922657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 215298 |
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| End bp | 216278 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640161725 |
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| Product | N-acetyl-gamma-glutamyl-phosphate reductase |
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| Protein accession | YP_001092333 |
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| Protein GI | 127511136 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0002] Acetylglutamate semialdehyde dehydrogenase |
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| TIGRFAM ID | [TIGR01850] N-acetyl-gamma-glutamyl-phosphate reductase, common form |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000978996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.083139 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAGCA TAGCGATAAT TGGCGCCAGT GGTTACACAG GTGCTCAGGT TACTTCACTG
ATCCAGGCCG ATGATCAGCT TAAGATTCAA GGCCTCTATG TTTCTGAAAA CAGTCTGGAT
AAGGGCAAAA CTCTGGCTAG CCTGTATCCG GTTTACAGCC ATATTGATCT TAGCCTGGCA
CCGCTAACAG AGCAGGCCAA GCAGGCCATA GTCAATGAGG CAGATGCCGT GGTGTTGGCG
ACCGACCATG GTGTGAGCCT GCACCTGGCG GCCTGGTTCT ATCAGGCGGG TCTGGCGGTT
TTCGACCTGA GTGGCGCCTA CCGTTTTGCC GATAGCGAAC AGTATCCCAA ATGGTATGGT
TTCGAGCATA TCTACCCAGA GGTGTTGGCC GAGGCCGTCT ATGGTCTGGC GGAGTGGAAC
ACGGAGGCGA TTGCCGCCAG CAAGATGATT GCTGTGCCAG GGTGTTATCC CACGGCTTCA
CTGACGGCAC TGAAACCCCT GAAAGATCTG ATGACAGACA GCCTGCCGGT GATCAATGCC
GTCAGTGGTG TGACCGGTGC AGGCAGAAAG GCGCAGCTGC ACACCAGCTT CTGCGAGGTG
AGCCTGACGC CCTACGGCGT GCTGGGTCAT AGACATCAAC CCGAGATTGC GACTCAGCTG
GGGCAGCAGG TGATCTTCAC CCCTCACCTG GGCAACTTTA AGCGTGGCAT CCTGGCTACC
ATTACCGTGC AGATGAAGCC CGGGGTGAGC GAAGCCGATA TTGCCAAGGC CTATGAAGTG
TATGAGTCGG CACCTCTGGT GAATGTGTAC CATAATCAAT TTCCTAAGGT TGACGACGTG
GTGCATACCC CTAACTGCCT GCTGGGATGG AAGTACGATC CCCTCAATGG CTACCTGGTG
GTGGCGAGCG CTATCGACAA TCTGATGAAA GGTGCGGCCA GTCAGGCGCA TCAATGCATA
AAGATTCATT TTAATTATTA A
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| Protein sequence | MKSIAIIGAS GYTGAQVTSL IQADDQLKIQ GLYVSENSLD KGKTLASLYP VYSHIDLSLA
PLTEQAKQAI VNEADAVVLA TDHGVSLHLA AWFYQAGLAV FDLSGAYRFA DSEQYPKWYG
FEHIYPEVLA EAVYGLAEWN TEAIAASKMI AVPGCYPTAS LTALKPLKDL MTDSLPVINA
VSGVTGAGRK AQLHTSFCEV SLTPYGVLGH RHQPEIATQL GQQVIFTPHL GNFKRGILAT
ITVQMKPGVS EADIAKAYEV YESAPLVNVY HNQFPKVDDV VHTPNCLLGW KYDPLNGYLV
VASAIDNLMK GAASQAHQCI KIHFNY
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