| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0200 |
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| Symbol | |
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| ID | 4922459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 211110 |
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| End bp | 213746 |
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| Gene Length | 2637 bp |
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| Protein Length | 878 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640161723 |
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| Product | phosphoenolpyruvate carboxylase |
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| Protein accession | YP_001092331 |
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| Protein GI | 127511134 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2352] Phosphoenolpyruvate carboxylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.611049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.122744 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGATA TGTACGCGTC GCTGCGATCC AATGTGGGCA CATTAGGCCA AATATTAGGC
GATACTATTC GCACACACAT GGACGAGCCC TTTTTAGATA AGATTGAACA GATCAGACAC
CTGGCCAAGA GCTCACGCCA AGGCAACGAT ACCGCCAGGG AACAGATGCT TACCCTACTG
GCCGCCTTAC CCGACGAAGA GTTGGTACCA TTTGCCAAGG CCTTCAACCA GTTTCTCAAC
CTGGCCAATA TCGCCGAGCA GTTCCATACC ATCAGCCGCA ACTGTGACGA GCTGGTCTGC
GTGCCCGATC CTGTGGATCA ACTCCTGGGG CGCATGCTAA ATGGGCGCAT CGACCAAGAT
AAGATGCTCG AGTGTCTACA GACACTGGAT ATCGATCTGG TGCTTACGGC GCACCCAACA
GAGATCTCCC GTCGCACCCT GATCCAGAAA TACTCCGCCG TGGTCGATTG TCTCGCCACC
ATGGAAAACC CGCAGCTCAC CGAGCGCGAA AAGAAACAGA ATCACCTCAG ACTCAGACAG
CTTATCGCCC AGATCTGGCA CACCAACGAG ATACGCCACG AGCGCCCAAC ACCGGTGGAC
GAAGCCCGCT GGGGACTAAG CACCATAGAG GCGTCACTCT GGCAAGCCAT TCCCGATTTT
CTGCGCCAGC TCAACGAACA GGTCGAAGAG CGCACCGGTA AGCAGCTGCC CAGCGACATA
GCCCCCATTC GCTTCTCCAG CTGGATGGGC GGCGATCGCG ACGGCAACCC CTTCGTCACC
GCCAAAGTCA CCCAGGAAGT ATTGGATCGC AACCGCCACA CCGCGGCGCG CCTCTATCTC
AAGGATGTGG TCTTGCTGGT CAACGAGCTG TCGATGGAGG AGGCCAACGA AGAACTGCTG
GCCCTTACAG ACAACAGCCA TGAACCTTAC CGCGTGGTGC TGCGGGAGCT AAGACAGAAG
CTACGCGACA CCATAGATTA TCTAAACGCC CGCCTCGAGG GGCATTCGCC CGAGGTGGAT
CTCGATAGCC TTATCTGGCA CGAGGACGAT CTCAAACAGC CTTTGACCCT GCTCTATCGC
AGCCTGACTG AGTCAGGTAT GAGCTTGATC GCCAATGGCC TGCTGCTGGA TATGCTGCGT
CGTCTGGCCT GCTTTGGTAT CCATATGCTG CGCCTGGATA TCCGCCAAGA TGCCCAGCGC
CATAGCGACG TCATCGCCGA GCTGACCCGT TACCTGGGCC TTGGCGACTT CGACCACTGG
GACGAACATG AGAAACAAGC CTTCCTGCTG CGGGAACTGA GTGGCAAACG CCCGCTGATC
CCCCATAACT GGGAACCGAG TGCCGAAGTT GCCGAGGTGA TCAGCACCGT CAGATTGATC
GCCAGCCAGT CGCCTAAGGC CCTGGGCTCC TATGTCATCT CCATGGCGAG CCAGCCGTCG
GACGTATTGA CTGTGCTCCT GCTATTGAAA GAGGCAGGAT GTCAGCATCC GATGCGGGTG
GTGCCACTGT TCGAGACCTT AGAGGACCTT AACAACGCCG CCAGCTGTAT CTCGGCGCTA
TTCGCCATCG ACTGGTACCG CGGCTACTGC AAGGGCAGCC AGGAGGTGAT GATAGGCTAC
TCAGACTCGG CTAAAGATGC TGGCGTAATG GCGGCCGCCT GGGCACAATA CAGTGCGCAG
GAAAAACTGG TTAAGGTCTG TAACCAGGCA GACATCAAGC TCACCCTGTT CCACGGCCGT
GGCGGCACCA TAGGCCGTGG CGGCGGACCA GCTCACAAGG CGATCCTGTC GCAGCCACCG
GGCTCGGTAG ATGGCCGCAT CAGGGTAACG GAACAAGGAG AGATGATCCG CTTCAAGTTC
GGCCTGCCTA AGTTGGCAGT GCAGAGCCTG GCGCTATATA CCTCGGCCGT GATGGAGGCC
ACCCTGTTGC CGCCACCAGA ACCTAAGCCA GAGTGGCGCG AGGCGATGGA GCGACTCGCC
AGTGACTCGG TCACCGCCTA TCGCGCCATA GTGCGTGAGG AGCCAGATTT TGTCGCCTAC
TTCCGCGCGG CAACTCCTGA AGTCGAGCTC GGTAAGCTAC CGCTAGGTAG CCGCCCCGCG
AAACGTCGGG TGGATGGCGG TATCGAGAGC CTGCGTGCGA TCCCCTGGAT CTTCGCCTGG
TCGCAGAACC GCTTGATGCT CCCCGCTTGG CTAGGCGCCG GCGAGGCGCT GCAGCAGGCT
GCCGACCGTG GCGAACTGAC CCTGCTAAGG GAGATGGAGC AACAATGGCC CTTCTTCGAG
ACTCGTATCT CCATGCTAGA GATGGTCTAC GCCAAGGCCG AGCCTAACCT GGCGAAGTAC
TATGAAACCT GCCTGGTGCC GCAAGAGCTA CATCATCTCG GCGAAGCCCT ACGTAGCCGG
ATGGCGACAG GGATCAAGGT GGTCTTGGAG CTGACCCAGT CCGATGCCCT GATGTCGCAT
ACCCCGTGGA ATCGTGAGTC GGTAGAGCTG CGCAATCCCT ATATCGACCC GCTCAACTTC
CTCCAGGCCG AACTCCTGGC GCGTACCCGC AAGGAGCAGG CAGGATCAAG CAATGTCGAA
CTGGCACTGA TGCTCACCAT CGCCGGTGTG GCGGCGGGCA TGAGAAACAC GGGTTAA
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| Protein sequence | MTDMYASLRS NVGTLGQILG DTIRTHMDEP FLDKIEQIRH LAKSSRQGND TAREQMLTLL
AALPDEELVP FAKAFNQFLN LANIAEQFHT ISRNCDELVC VPDPVDQLLG RMLNGRIDQD
KMLECLQTLD IDLVLTAHPT EISRRTLIQK YSAVVDCLAT MENPQLTERE KKQNHLRLRQ
LIAQIWHTNE IRHERPTPVD EARWGLSTIE ASLWQAIPDF LRQLNEQVEE RTGKQLPSDI
APIRFSSWMG GDRDGNPFVT AKVTQEVLDR NRHTAARLYL KDVVLLVNEL SMEEANEELL
ALTDNSHEPY RVVLRELRQK LRDTIDYLNA RLEGHSPEVD LDSLIWHEDD LKQPLTLLYR
SLTESGMSLI ANGLLLDMLR RLACFGIHML RLDIRQDAQR HSDVIAELTR YLGLGDFDHW
DEHEKQAFLL RELSGKRPLI PHNWEPSAEV AEVISTVRLI ASQSPKALGS YVISMASQPS
DVLTVLLLLK EAGCQHPMRV VPLFETLEDL NNAASCISAL FAIDWYRGYC KGSQEVMIGY
SDSAKDAGVM AAAWAQYSAQ EKLVKVCNQA DIKLTLFHGR GGTIGRGGGP AHKAILSQPP
GSVDGRIRVT EQGEMIRFKF GLPKLAVQSL ALYTSAVMEA TLLPPPEPKP EWREAMERLA
SDSVTAYRAI VREEPDFVAY FRAATPEVEL GKLPLGSRPA KRRVDGGIES LRAIPWIFAW
SQNRLMLPAW LGAGEALQQA ADRGELTLLR EMEQQWPFFE TRISMLEMVY AKAEPNLAKY
YETCLVPQEL HHLGEALRSR MATGIKVVLE LTQSDALMSH TPWNRESVEL RNPYIDPLNF
LQAELLARTR KEQAGSSNVE LALMLTIAGV AAGMRNTG
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