| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0195 |
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| Symbol | |
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| ID | 4922428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 201814 |
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| End bp | 202293 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640161714 |
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| Product | cytochrome C biogenesis protein |
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| Protein accession | YP_001092326 |
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| Protein GI | 127511129 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes |
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| TIGRFAM ID | [TIGR03147] cytochrome c nitrite reductase, accessory protein NrfF |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00319967 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0437766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGACCT TAGTCGGGTT TATTACCGCA ATACTGTTAT CTTTCTCGCT GGTGGGCGCC
GCGATGGCGA CCCCAGTGGA TACCTATGAG TTTAAGTCGG TAGATAACCA GAAACGAGCC
CTCGAACTGG CTCACTCGCT GCGTTGTCCT CAGTGTCAAA ACCAGAACCT GATCGATTCC
AATTCACCTG TGGCGCAAGA TCTGCGACTC GAAGTCTATC AAATGGTCGA TGCCGGTAAG
GGCGACGAAG AGATTATCGA GTTCATGACT AGCCGTTACG GTGAGTTCGT CCTCTATAAG
CCACGCATGG AAGCCAAGAC TTACATCCTA TGGCTAGGGC CAATCGCGCT ATTGCTGGTG
GGCTTAGTGA TCGGCTTTAT CTTCGTTAGA CAGCAGCGAA TCAGCAATGC CGTCGAACAG
GAGATCAGCG CCGAGGAGCA AGCCGAGTTG GATAGACTGC TCAAGCGAGA CGATAAATGA
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| Protein sequence | MKTLVGFITA ILLSFSLVGA AMATPVDTYE FKSVDNQKRA LELAHSLRCP QCQNQNLIDS
NSPVAQDLRL EVYQMVDAGK GDEEIIEFMT SRYGEFVLYK PRMEAKTYIL WLGPIALLLV
GLVIGFIFVR QQRISNAVEQ EISAEEQAEL DRLLKRDDK
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