Gene Shew_0191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0191 
Symbol 
ID4922152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp197116 
End bp197409 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content47% 
IMG OID640161710 
Productcytochrome c, class I 
Protein accessionYP_001092322 
Protein GI127511125 
COG category[C] Energy production and conversion 
COG ID[COG3245] Cytochrome c5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000235852 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00582407 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAC TGTTAGCATT GTCTGCAGTG GCTGCATTGA CCTTGTCTGC AAACACTTTT 
GCACAAGAAG GTGAAGCTGT ATATAACAAG GCATGCCATG TATGCCACAG TATGGGTGTC
GCCGGTGCCC CTAAAGCTCA TGATGCAGCT GCATGGGAGC CTCGTTTAGC GAAAGGCCTA
GACGCACTAC TAGGTAGTGT TAAGACTGGT CTGAACGCTA TGCCACCAGG TGGTATGTGC
ACAGATTGTA CCGACGAAGA TTACAAGAAC GCTATCGAGT TCATGTCTAA GTAA
 
Protein sequence
MKKLLALSAV AALTLSANTF AQEGEAVYNK ACHVCHSMGV AGAPKAHDAA AWEPRLAKGL 
DALLGSVKTG LNAMPPGGMC TDCTDEDYKN AIEFMSK