| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0184 |
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| Symbol | rplQ |
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| ID | 4921036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 192444 |
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| End bp | 192836 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640161703 |
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| Product | 50S ribosomal protein L17 |
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| Protein accession | YP_001092315 |
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| Protein GI | 127511118 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0203] Ribosomal protein L17 |
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| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000125039 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00140604 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCGCCATC GTAAGAGTGG TCGTCAACTA AACCGTAACA GCAGTCATCG TCAAGCTATG
TTCCGTAACA TGGCAAGCTC TTTAGTCCGT CACGAAGTGA TCAAGACTAC TGTAGCTAAA
GCGAAAGAAT TGCGTCGCGT AGTTGAACCT CTAATAACAC TTGCTAAGAG TGACAGTGTT
GCAAACCGTC GTTTGGCATT TGCACGTACT CGCGACGCTG AAGTCGTAGG TAAGTTATTT
AATGAATTGG GTCCACGCTA CCAGGAACGT CCTGGTGGAT ACACCCGTAT CCTTAAGTGC
GGTCTTCGTA CTGGTGATAA GGCGCCTATG GCGTATATCG AACTAGTAGG TCGTCCAGAA
GCTGCTGAAG CTGTTGAAGA AGCTGCTGAG TAA
|
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| Protein sequence | MRHRKSGRQL NRNSSHRQAM FRNMASSLVR HEVIKTTVAK AKELRRVVEP LITLAKSDSV
ANRRLAFART RDAEVVGKLF NELGPRYQER PGGYTRILKC GLRTGDKAPM AYIELVGRPE
AAEAVEEAAE
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