| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0181 |
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| Symbol | |
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| ID | 4921089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 190341 |
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| End bp | 190733 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640161700 |
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| Product | 30S ribosomal protein S11 |
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| Protein accession | YP_001092312 |
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| Protein GI | 127511115 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0100] Ribosomal protein S11 |
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| TIGRFAM ID | [TIGR03632] 30S ribosomal protein S11 |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000807145 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00156032 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCTAAAG TTCCGTCACG TTCAACGCGC AAGCGCGTAC GTAAACAGGT TGCTGATGGC
ATGGCTCATA TCCATGCATC TTTCAACAAC ACCATTATCA CCATTACAGA TCGTCAAGGT
AATGCACTTT CTTGGGCAAC TTCTGGTGGT TCAGGTTTCC GTGGTTCACG TAAATCTACA
CCATTTGCTG CACAGGTAGC TGCTGAGCGC GCAGGTGTTG CTGCTCAGGA CTACGGTGTT
AAAAACCTTG AAGTTTTCGT GAAGGGTCCA GGTCCAGGAC GTGAGTCAGC TATTCGAGCG
CTGAACGCGG TTGGTTACAA GATAACCAAC ATTACCGATG TGACGCCGAT CCCTCATAAT
GGTTGTCGTC CTCCTAAGAA ACGTCGCGTG TAA
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| Protein sequence | MAKVPSRSTR KRVRKQVADG MAHIHASFNN TIITITDRQG NALSWATSGG SGFRGSRKST
PFAAQVAAER AGVAAQDYGV KNLEVFVKGP GPGRESAIRA LNAVGYKITN ITDVTPIPHN
GCRPPKKRRV
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