| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0165 |
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| Symbol | rplP |
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| ID | 4920780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 183314 |
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| End bp | 183724 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640161684 |
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| Product | 50S ribosomal protein L16 |
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| Protein accession | YP_001092296 |
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| Protein GI | 127511099 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0197] Ribosomal protein L16/L10E |
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| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000800282 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000293635 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCTGCAAC CAAAACGAAT GAAGTTTCGT AAAATGTTCA AAGGCCGTAA CCGCGGTCTG
GCGAACGGCA CTGAAGTAAG CTTCGGTGAG TTCGGTTTGA AAGCTGTTGG ACGTGGCCGT
CTGACTGCTC GTCAAATCGA ATCTGCGCGT CGTGCTATGA CACGTCACAT TAAACGTCAA
GGTCAAATTT GGATCCGCGT TTTCCCTGAC AAGCCAATCA CCTCTAAGCC TCTTGAAGTG
CGTATGGGTA AAGGTAAGGG TAACGTTGAA TACTGGGTTT GCCAGATTCA ACCTGGTAAG
GTTCTTTATG AGATGAATGG TGTATCAGAA GAGTTGGCTC GTGAAGCTTT CACTCTTGCT
GCTGCCAAGC TTCCTATTAA GACTACCTTC GTAACTAAGA CGGTGATGTA A
|
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| Protein sequence | MLQPKRMKFR KMFKGRNRGL ANGTEVSFGE FGLKAVGRGR LTARQIESAR RAMTRHIKRQ
GQIWIRVFPD KPITSKPLEV RMGKGKGNVE YWVCQIQPGK VLYEMNGVSE ELAREAFTLA
AAKLPIKTTF VTKTVM
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