| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0163 |
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| Symbol | rplV |
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| ID | 4920704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 182271 |
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| End bp | 182603 |
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| Gene Length | 333 bp |
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| Protein Length | 110 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640161682 |
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| Product | 50S ribosomal protein L22 |
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| Protein accession | YP_001092294 |
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| Protein GI | 127511097 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0091] Ribosomal protein L22 |
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| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000850597 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000466099 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGGAAGTTT TAGCTAAACA TCGTTTTGCC CGTACGTCGC CTCAAAAGTG TCGTTTGGTT
GCAGATCAAA TTCGTGGACT GCCTGTTGCT AAGGCTCTTG AAATTTTGAC TTTCAGCCCT
AAGAAAGCAG CTGTACTTGT TAAGAAAGTA CTAGACTCTG CTATCGCTAA TGCTGAGCAC
AACGAAGGTG CTGACATTGA CGAGCTGAAA GTTGGAAAAG TCTTTGTAGA CGAGGGTCCA
ACTATGAAGC GTATCATGCC ACGTGCTAAA GGCCGTGCTG ATCGTATTAT CAAGCGTACC
AGCCACATCA CTGTGGTTGT GTCAGATCGC TAG
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| Protein sequence | MEVLAKHRFA RTSPQKCRLV ADQIRGLPVA KALEILTFSP KKAAVLVKKV LDSAIANAEH
NEGADIDELK VGKVFVDEGP TMKRIMPRAK GRADRIIKRT SHITVVVSDR
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