| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0156 |
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| Symbol | |
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| ID | 4920567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 177680 |
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| End bp | 178864 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640161675 |
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| Product | elongation factor Tu |
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| Protein accession | YP_001092287 |
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| Protein GI | 127511090 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0050] GTPases - translation elongation factors |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000313949 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000051786 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | GTGGCTAAAG AAAAATTTGA ACGTAGTAAA CCCCATGTTA ACGTTGGTAC CATCGGTCAC
GTTGACCATG GTAAAACAAC TCTAACTGCT GCTATCTCTC ACGTACTGAC TAAGACTTAC
GGTGGTGAAG CTAAAGATTT CGCACAGATC GATAACGCTC CAGAAGAGCG TGAGCGCGGT
ATTACCATCA ATACCTCTCA CATCGAGTAC GACACTCCAA CTCGTCACTA CGCACACGTA
GACTGCCCAG GCCACGCTGA CTATGTTAAA AACATGATCA CTGGTGCTGC ACAGATGGAC
GGCGCTATCC TAGTAGTAGC TTCTACTGAC GGTCCAATGC CACAGACTCG TGAGCACATC
CTGCTTTCTC GTCAGGTAGG TGTACCTTTC ATCATCGTAT TCATGAACAA GTGTGACATG
GTTGACGATG AAGAGCTGCT AGAACTAGTA GAGATGGAAG TTCGTGAACT GCTATCTGAA
TACGACTTCC CAGGTGATGA CCTACCAGTT ATCCAAGGTT CAGCTCTGAA AGCCCTAGAA
GGCGAGCCAG AGTGGGAAGC TAAGATCCTA GAACTAGCTG AAGCTCTAGA TTCTTACATT
CCAGAGCCAG AGCGTGCTAT CGACGGTGCA TTCATTCTGC CAATCGAAGA CGTATTCTCA
ATCTCAGGCC GTGGTACTGT AGTAACTGGT CGTGTTGAGC GCGGTATCGT TAAAGTTGGT
GACGAAGTAG AAATCGTAGG TATCAAAGAA ACTACTAAGA CTACTTGTAC TGGTGTTGAA
ATGTTCCGTA AGCTGCTTGA CGAAGGTCGT GCAGGTGAGA ACTGTGGTGT ACTACTACGT
GGTACTAAGC GTGATGAAGT TGAGCGTGGT CAAGTACTGG CTCAGCCTGG TTCAATCACT
CCACACACTC AGTTCGAATC AGAAGTATAC GTACTGTCAA AAGAAGAAGG TGGTCGTCAC
ACTCCATTCT TCAAGGGCTA CCGTCCACAG TTCTACTTCC GTACAACTGA CGTAACCGGT
ACTATCGAGC TGCCAGAAGG CGTTGAAATG GTAATGCCTG GTGACAACAT CAAGATGGTT
GTTACCCTGA TCTGCCCAAT CGCGATGGAC GAAGGTCTAC GTTTCGCTAT CCGTGAAGGT
GGCCGTACAG TTGGTGCTGG TGTTGTAGCT AAGATCATCG CTTAA
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| Protein sequence | MAKEKFERSK PHVNVGTIGH VDHGKTTLTA AISHVLTKTY GGEAKDFAQI DNAPEERERG
ITINTSHIEY DTPTRHYAHV DCPGHADYVK NMITGAAQMD GAILVVASTD GPMPQTREHI
LLSRQVGVPF IIVFMNKCDM VDDEELLELV EMEVRELLSE YDFPGDDLPV IQGSALKALE
GEPEWEAKIL ELAEALDSYI PEPERAIDGA FILPIEDVFS ISGRGTVVTG RVERGIVKVG
DEVEIVGIKE TTKTTCTGVE MFRKLLDEGR AGENCGVLLR GTKRDEVERG QVLAQPGSIT
PHTQFESEVY VLSKEEGGRH TPFFKGYRPQ FYFRTTDVTG TIELPEGVEM VMPGDNIKMV
VTLICPIAMD EGLRFAIREG GRTVGAGVVA KIIA
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