| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0154 |
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| Symbol | |
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| ID | 4923754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 174958 |
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| End bp | 175428 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640161673 |
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| Product | 30S ribosomal protein S7 |
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| Protein accession | YP_001092285 |
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| Protein GI | 127511088 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0049] Ribosomal protein S7 |
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| TIGRFAM ID | [TIGR01029] ribosomal protein S7, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00529705 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000385897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGCCAAGAC GTCGCGTTGT AGGACAACGT AAAATCCTAC CAGATCCAAA ATTTAATAGT
GAGTTGCTGG CTAAGTTCAT CAACGTCATT ATGCAGGACG GCAAAAAGTC GACTGCTGAA
AAAATCATTT ACAAGGCACT AGACGTTGTC GCTGAGAAGA AAGGCGAAGA GCACCTAGTG
ATCCTTGAAG CAGCCCTGGA TAACGTACGC CCAACTGTCG AGGTTAAGTC TCGTCGTGTT
GGTGGTTCTA CTTACCAGGT ACCATGTGAA GTTCGTCCAG TGCGTCGTAA CGCACTAGCG
ATGCGCTGGT TAGTTGAAGC TGCACGTAAG CGTGGTGAAA AATCTATGGC TCTACGTCTA
GCAGGTGAAA TGCTAGATGC TGCCGAAAAC AAAGGCACTG CTGTTAAGAA GCGCGAAGAC
GTGCATCGTA TGGCAGAAGC AAACAAAGCG TTTGCTCATT ACCGCTGGTA A
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| Protein sequence | MPRRRVVGQR KILPDPKFNS ELLAKFINVI MQDGKKSTAE KIIYKALDVV AEKKGEEHLV
ILEAALDNVR PTVEVKSRRV GGSTYQVPCE VRPVRRNALA MRWLVEAARK RGEKSMALRL
AGEMLDAAEN KGTAVKKRED VHRMAEANKA FAHYRW
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