| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0145 |
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| Symbol | secE |
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| ID | 4921431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 162374 |
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| End bp | 162745 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640161664 |
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| Product | preprotein translocase subunit SecE |
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| Protein accession | YP_001092276 |
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| Protein GI | 127511079 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0690] Preprotein translocase subunit SecE |
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| TIGRFAM ID | [TIGR00964] preprotein translocase, SecE subunit, bacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000598149 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0330046 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAACAA ATACTGAAAA CCAGGGAAGC TCTCTGGATA TCGTTAAATG GGGCATAGTA
GTCGTACTGC TAGCGGCCGC CATTATTGCT AATCAGATGT ATAGCGAAGC TAGTGTATTA
GTTCGTGCTA TCGGTGTCGT AGTGGCATTT GCAATAGCAG GTTTTATCGC GCTTCAAACC
GAGAAGGGTA AACAAGCGCT GACTTTCGCT CGCGAGTCTC ACATTGAAGT GCGTAAAGTG
GTATGGCCGA CGCGTCAAGA AGCCCTAAAC ACGACATTTA TCGTACTACT GGCAACAGGT
GTACTGGCAT TGGTTCTGTG GGGAATGGAT GCGGTACTGC TGAGAATTGT TAATTTTATT
ACGGGCGTAT AG
|
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| Protein sequence | MTTNTENQGS SLDIVKWGIV VVLLAAAIIA NQMYSEASVL VRAIGVVVAF AIAGFIALQT
EKGKQALTFA RESHIEVRKV VWPTRQEALN TTFIVLLATG VLALVLWGMD AVLLRIVNFI
TGV
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