| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0143 |
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| Symbol | |
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| ID | 4920421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 159254 |
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| End bp | 160204 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640161659 |
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| Product | pantothenate kinase |
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| Protein accession | YP_001092274 |
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| Protein GI | 127511077 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1072] Panthothenate kinase |
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| TIGRFAM ID | [TIGR00554] pantothenate kinase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000477456 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0338371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCGCCA ACAACCAAAT TCACAATGCA CTCTATCTCG CATTTGCCCG CCAACAGTGG
GCCGAGCTGC GAAAATCTGT GCCTCTGACA CTCAGCGAAT CCGATCTCGA CGATCTGCGC
GGTATTAACG AATCTATCTC CCTCGATGAA GTCACCGACA TCTATCTGCC CCTTAGCCGC
CTGCTGAACC TGATCGTCGG TGCCAAGCAG CAGAGAGGAC TGGTACTGAA TCAGTTTCTC
GGTCGTGTAC CGCCTAAGCG TCCCTATATT ATTAGCATCG CCGGCAGTGT CGCGGTAGGC
AAGAGTACTA CGGCGCGTAT CCTTCAAGCA CTACTGCGTC AGTGGCCCGA GCATCCCAAG
GTGGACCTGG TCACCACAGA TGGCTTCCTA TATCCCCTGT CTGAGCTCAA ACGCCGCGGA
CTGCTACAGC GTAAGGGATT TCCAGAAAGC TATGATATGA AACTGCTGGT CGAGTTCATC
TCCAAGATCA AGGCAGGTGA GAGTCTGGTA CATGCGCCTA TCTATTCTCA TATCAGTTAC
GACCGAGTGG CCGATACACA GCAGGCCATA GAACAGCCCG ATATCCTGAT CATCGAAGGG
CTCAACGTAC TGCAGACGGG CCAGGATACC CATGTGGCCA TTCAGCAGCC CTTCGTGTCC
GACTTTGTCG ACTTCTCTAT CTATGTGGAT GCCGAAGAGC CGCTGCTCAA GGAGTGGTAT
ATCTCCCGCT TCCTCAAATT CCGCACCGGC GCCTTTAGCG ACCCTAACTC ATACTTCCAT
CACTATTCAG AACTGACTGA CGATGAGGCC ACCAAGATAG CCGCCAACAT CTGGGACAGC
ATCAACGGCC CTAACCTGAA TCTGAATATT CTGCCTACCC GAGACAGGGC GCATCTTATC
CTGCGCAAGG GCACAGATCA TATGATGCAC CAGGTGCTGA TGCGTAAATA G
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| Protein sequence | MRANNQIHNA LYLAFARQQW AELRKSVPLT LSESDLDDLR GINESISLDE VTDIYLPLSR
LLNLIVGAKQ QRGLVLNQFL GRVPPKRPYI ISIAGSVAVG KSTTARILQA LLRQWPEHPK
VDLVTTDGFL YPLSELKRRG LLQRKGFPES YDMKLLVEFI SKIKAGESLV HAPIYSHISY
DRVADTQQAI EQPDILIIEG LNVLQTGQDT HVAIQQPFVS DFVDFSIYVD AEEPLLKEWY
ISRFLKFRTG AFSDPNSYFH HYSELTDDEA TKIAANIWDS INGPNLNLNI LPTRDRAHLI
LRKGTDHMMH QVLMRK
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