| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0139 |
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| Symbol | |
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| ID | 4922355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 149128 |
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| End bp | 149928 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640161650 |
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| Product | glutamate racemase |
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| Protein accession | YP_001092270 |
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| Protein GI | 127511073 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0796] Glutamate racemase |
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| TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000684264 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0718658 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGTCAGCAA ATATACTCGT GTTCGATTCC GGGGTAGGCG GCCTGTCGAT ATTGGCGGCG
GTGCGAGAGC AGCTTCCCAG TGCGAACTAC TGTTATCTGT TTGACAATGC CAGGCTACCC
TATGGCGAAC TTGACGAGCA GGAGCTGATC CAAGGTTGCG TGACCTTAAT TAGTCAGGCG
GTTATTCAGT GCCAGGCTGA TATCGTGGTC GTGGCCTGTA ACAGTGCCAG CACACTCATA
TTGCCAGCGT TAAGAGCCTG CCTGAAGGTG CCCGTGGTGG GCGTCGTTCC GGCTATCAAG
CCCGCGGCGG CGTTATCACA GAAGAAACAC CTTGGGCTAT TGGCAACGCC CGGTACTGTC
AATCGCCAAT ACACCCAAGA TCTTATCGAT CAGTTTGCCA GTGATTGTCG CGTGGACAGA
TTTGGCTCCT CCGAGCTGGT CTATCTGGCC GAGGATAAGA TGGCGCAGCG GCCTGTGGAT
AGCGAGGCTC TGCATCGTAT CCTTGCACCA ATCAAAGCAT CCGGGTTAGA CACCCTGATC
CTCGGCTGTA CTCACTTTCC GATTCTAAGA GAGGAGCTGC AAAGCTACTT GGGTGAGGGC
GTGCATCTAT TAGATTCATC CAACGCTATT GCGGCCAGGG TGGTGAGCCT GCTCGAGCCG
AGCATGAGTG GAGAGATAGG TAAGAGTCAG GCACTTTACA CGACAGATAG TATTTGCGAG
GGATTAAGGA AGACCTTAGC TGCCTGGGGA TTCAGATCGG CTACCGCCTT TCGCGATAGC
CTGATGCCAA TAGGCAGCTA G
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| Protein sequence | MSANILVFDS GVGGLSILAA VREQLPSANY CYLFDNARLP YGELDEQELI QGCVTLISQA
VIQCQADIVV VACNSASTLI LPALRACLKV PVVGVVPAIK PAAALSQKKH LGLLATPGTV
NRQYTQDLID QFASDCRVDR FGSSELVYLA EDKMAQRPVD SEALHRILAP IKASGLDTLI
LGCTHFPILR EELQSYLGEG VHLLDSSNAI AARVVSLLEP SMSGEIGKSQ ALYTTDSICE
GLRKTLAAWG FRSATAFRDS LMPIGS
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