| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0136 |
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| Symbol | |
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| ID | 4920534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 145879 |
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| End bp | 146985 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640161647 |
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| Product | stearoyl-CoA 9-desaturase |
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| Protein accession | YP_001092267 |
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| Protein GI | 127511070 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1398] Fatty-acid desaturase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0276259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.402549 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC CTCCCCTCAT CTGGACCAAC ATTTTACTCT TTGCCATCAC CTTCTTAGGT
GCTGTCATCC TGGTGCCTTG GTATGGCATC ACCTATGGCT ATGGCATGGC AGAATGGGTT
GCCTTTGTCG GCCTCGCCTT CGCCAGCGGT CTGTCGATAA CCGCCGGATA CCATAGGCTC
TGGTCACATC GCACCTACAA GGCACACTGG TCGGTACGTT TTCTGTTTGC CTTGGGCGGC
GCCCTAGCTC TGCAGAACAG CGCCCTGCAC TGGTCGTCGG ATCATCGCAT CCATCACAAG
CATGTGGATG ACAACGACAA AGACCCCTAT TCGGCTAACA TGGGTTTCTG GTACAGCCAT
ATCGGCTGGA TGCTAAGGGA GTATCAGGCG CAGCGTTATC ACGATTATAA GAACGTGCGT
GATCTGCAGA ATGAGAAAAT TGTGATGTGG CAGCACAAAT ATTATCTGCC GCTCCTCATC
ATCATGAACA TAGGCCTGCC GGCGCTGCTG GGCTGGCTTA ATGGCGATGT CTGGGCCATG
TTGCTGATGG CTGGCCTGCT GCGTCTGGTG GTCGTGCACC ATTGCACCTT CTTCATCAAC
TCGCTGGCCC ACATCTGGGG CAGCCAGCCC TACACAGACA AAAACACGGC GCGTGACAAC
GGCGTGCTGG CACTGTTTAC CTATGGCGAG GGCTATCATA ACTTCCACCA CATCTTCGAG
AACGACTATC GCAACGGCAT CCTCTGGTGG CACTATGATC CCACCAAATG GCTGATCAAC
GCCATGGCCT GGACTGGACT GGCCAACAAC CTCAGGGTCA CGCCACAGGA GCGGATCGAG
AGTGCCAAGT TGCAGATGCA ACTGAAGAAG GCACAGCATA AGGTCACACA GCTGGCCAAC
CACGAAGAGA TCCTCGAGAA GATCCATGCG GAATATGAGC TGCTCAAGAC CCATATTGCC
GATTACTATC AGGCCCATAA GGAGCTGCTG GAAGCCAAGC GCAAACAGCT GACCACACAT
CAGCTGATGC AGCAGGTAGA GCACCTGAAG CAGGAACTCC TGGCACGCCA GAAGCAGTGG
AAGTCCCTCA CCACAGGCTT TGCCTAG
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| Protein sequence | MKKPPLIWTN ILLFAITFLG AVILVPWYGI TYGYGMAEWV AFVGLAFASG LSITAGYHRL
WSHRTYKAHW SVRFLFALGG ALALQNSALH WSSDHRIHHK HVDDNDKDPY SANMGFWYSH
IGWMLREYQA QRYHDYKNVR DLQNEKIVMW QHKYYLPLLI IMNIGLPALL GWLNGDVWAM
LLMAGLLRLV VVHHCTFFIN SLAHIWGSQP YTDKNTARDN GVLALFTYGE GYHNFHHIFE
NDYRNGILWW HYDPTKWLIN AMAWTGLANN LRVTPQERIE SAKLQMQLKK AQHKVTQLAN
HEEILEKIHA EYELLKTHIA DYYQAHKELL EAKRKQLTTH QLMQQVEHLK QELLARQKQW
KSLTTGFA
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