| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0130 |
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| Symbol | |
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| ID | 4922781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 139630 |
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| End bp | 140442 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640161641 |
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| Product | 3'(2'),5'-bisphosphate nucleotidase |
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| Protein accession | YP_001092261 |
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| Protein GI | 127511064 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase |
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| TIGRFAM ID | [TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.835537 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCAG AAGAGTATGT TGAGCAGGCG ATTTCGATTG CCATCGAGGC GGGTGAGGCC
ATCAAAGGGA TCTACCTCGA GGGCAGTTTT GACAAAGAGG TGAAATCCGA CAATACCCCG
GTAACCTCTG CCGATATCGC GGCCCATGAG ATCATCTCTT CCCAGCTAAG CAGCCTTACC
CCTGAGATCC CAGTCCTCTC TGAAGAAGAT GCCGATATTC CTTTCTCCGA GCGCGCCGAT
TGGCAGCGTT ACTGGTTGGT AGACCCTCTC GATGGCACGG GTGAGTTTAT CGCCGGTAGC
GGCGACTTCT CGGTGATCAT CGCCCTGGTC GAGCACAATC GTCCCATCAT GGGAATCGTC
TATGTGCCCA TGACGGGTGT GGTTTACTAT GCCGTGGCAG GCCTGGGTGC CTACAAGCGT
AGCAGCAAGG GCGAGGTGCG TATCGCCAGC AAGCAGCTGA CCAAAGACGA TGAGCCCTGC
CTGCGTCTGG CGGTGAGCCG CCGTCAGGAT CCTCAATCTG TGTTGAAGCT TTTCAATCAT
CCTAAGCACT GTGAACTCGT GGTGCTGGGC GGTGCGGCGC TAAAGAGCTG CCTGGTGGCA
GAGGGCCGCG CCGACTGCTA TGTGCGCATT GGCCCAACCG GCGAGTGGGA CACCGGTGCG
GCGCAGATCA TCATCGAAGA GGCCGGTGGC CAGGTGATGG ATCTCGAGTT GCAGCCGTTG
AGCTACAACG AGCGCGAATC ACTGGAGAAC CCCAACTTCA TCGTCGTGGG CTCGACTCAC
CTGCCATGGG ATGAGCTGTT AACCGGTGAA TAA
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| Protein sequence | MKPEEYVEQA ISIAIEAGEA IKGIYLEGSF DKEVKSDNTP VTSADIAAHE IISSQLSSLT
PEIPVLSEED ADIPFSERAD WQRYWLVDPL DGTGEFIAGS GDFSVIIALV EHNRPIMGIV
YVPMTGVVYY AVAGLGAYKR SSKGEVRIAS KQLTKDDEPC LRLAVSRRQD PQSVLKLFNH
PKHCELVVLG GAALKSCLVA EGRADCYVRI GPTGEWDTGA AQIIIEEAGG QVMDLELQPL
SYNERESLEN PNFIVVGSTH LPWDELLTGE
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