| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0127 |
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| Symbol | |
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| ID | 4920491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 137523 |
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| End bp | 138140 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640161638 |
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| Product | LexA repressor |
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| Protein accession | YP_001092258 |
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| Protein GI | 127511061 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGACCCT TAACCCCGAG ACAAGCCGAG ATTTTAGATC TGATAAAACG CAATATTGCC
GACACGGGCA TGCCGCCTAC CCGTGCCGAG ATTGCGCGTC GACTAGGCTT TAAGAGTGCC
AACGCCGCCG AGGAACACCT CAAGGCCCTG GCCAAGAAAG GCTGCATCGA AATCATGCCC
GGCACATCAC GTGGCATCAA GCTGACCCAG GAGGAAGAGC CTGAAGATCT CGGCCTGCCC
CTCATAGGTC AGGTGGCCGC CGGTGAGCCC ATCCTGGCCC AGGAGCATGT GGAACAACAC
TATCAGGTTG ACCCTAGCAT GTTCCGCCCC AGCGCCGACT TCCTGCTGCG GGTCAGGGGG
GACAGTATGA AAGATATAGG TATTCTCGAG GGCGACCTAC TCGCGGTACA TAAGGTCGAA
CAGGCAAGAA ACGGCCAGAT AGTCGTGGCC CGCGTGGAAG ATGATGTAAC GGTTAAACGC
TTCGAGAAGC GTGGCAGCAC CGTCTATCTG CATGCCGAGA ATGAAGAGTA TTCCCCTATC
GTGGTGGACC TCACCACCCA GAGCCTGAGC ATCGAAGGCC TGGCCGTCGG CGTTATTCGA
AATGGAGACT GGCAATGA
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| Protein sequence | MRPLTPRQAE ILDLIKRNIA DTGMPPTRAE IARRLGFKSA NAAEEHLKAL AKKGCIEIMP
GTSRGIKLTQ EEEPEDLGLP LIGQVAAGEP ILAQEHVEQH YQVDPSMFRP SADFLLRVRG
DSMKDIGILE GDLLAVHKVE QARNGQIVVA RVEDDVTVKR FEKRGSTVYL HAENEEYSPI
VVDLTTQSLS IEGLAVGVIR NGDWQ
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