Gene Shew_0121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0121 
Symbol 
ID4920544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp131798 
End bp131974 
Gene Length177 bp 
Protein Length58 aa 
Translation table11 
GC content53% 
IMG OID640161632 
Producthypothetical protein 
Protein accessionYP_001092252 
Protein GI127511055 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTCTTCA TTATCTTTAA TCTTGGCCGG GCCTTATTTG TCTTAGTGAA GGGAGAGGGC 
AAGGCGCCCA TGAGTCAGTA TCTGGGGCGG CGTGTGCTCT TCTCTGTGCT GGTGGTGCTC
CTGCTATTGA TTGCCTTGGG ACTGGGGATC ATCACCCCCA ATCCCAGACC CTATTAG
 
Protein sequence
MVFIIFNLGR ALFVLVKGEG KAPMSQYLGR RVLFSVLVVL LLLIALGLGI ITPNPRPY