| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0118 |
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| Symbol | |
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| ID | 4923531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 129295 |
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| End bp | 130278 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640161629 |
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| Product | cytochrome oxidase assembly |
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| Protein accession | YP_001092249 |
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| Protein GI | 127511052 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1612] Uncharacterized protein required for cytochrome oxidase assembly |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATGA CTTCCCTACT CAAACTCACC CTGGTCTTTA CCCTGTGCGT GATACTTATG
GGTGCCTACA CCCGACTGTC TGACGCCGGC CTTGGCTGCC CCGACTGGCC CGGCTGCTAT
GGCATGATCA AGGTGCCCAC CCAGAGCCAT GAGCTGGCCA AAGCCCAGGA CAGCTTTCCC
GAACACACGG TAGAACCCGA GAAGGCCTGG CTGGAGATGA TCCACAGATA CATTGCCGGC
ACCCTGGGCC TGCTGGTCGC CTTCATCCTC TTCATCAGCT TCAGGCGGCC CGATGCTCCT
AAGAAGCTGC CGAGCTTTAT CGCCCTGCTG ATCCTATTTC AGGCGGCGCT GGGAATGTGG
ACCGTCACCA TGAAACTCAT GCCCGTGGTG GTGATGTCCC ACCTGATAGG CGGCTTTACC
CTGATCTCCT TATTGTGGCT CCTCTACCTC AGGACCAAGC CGCTACGACT GCCCGGCGGC
GAGCCAAGGC TGCGAAAACT GGCACCCTAC GCCCTCTTCT GCCTTAGCTT ACTCGTGCTG
CAGATCATCC TGGGCGGCTG GACCTCCTCT AACTATGCGG CGCTGGCCTG CACCACACTG
CCCATCTGCG AAGGAGACTG GGTAAGCAAC CTCGACCCGC TGCATGCCTT CTATCCCCTG
CATAAGACGG AAGGTAGCTA CGAGTTCGGC ATACTGGATT ACTCCTCCCG CATGACGATT
CATGTGGCTC ACAGATTCGG CGCCATCATC ACGGCGACCG CACTGCTCTG GCTGGTGTAT
TGCATGATTA AATTCTCACA CTCTCAGCTG CTGAAACGCA GTGCCTGGGT ACTCCTGGGG
TTATTGTGCC TGCAGATAGC CCTGGGGATC AGCAACGTGG TGCTGCACCT TCCCCTGGGG
ATCGCCGTGT CCCATAACGC GGGCGCCGCA CTCCTGTTAC TCACCTTGGT CTTCATCAAC
TACGCCCTGT GGCGTAAGGC ATAA
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| Protein sequence | MQMTSLLKLT LVFTLCVILM GAYTRLSDAG LGCPDWPGCY GMIKVPTQSH ELAKAQDSFP
EHTVEPEKAW LEMIHRYIAG TLGLLVAFIL FISFRRPDAP KKLPSFIALL ILFQAALGMW
TVTMKLMPVV VMSHLIGGFT LISLLWLLYL RTKPLRLPGG EPRLRKLAPY ALFCLSLLVL
QIILGGWTSS NYAALACTTL PICEGDWVSN LDPLHAFYPL HKTEGSYEFG ILDYSSRMTI
HVAHRFGAII TATALLWLVY CMIKFSHSQL LKRSAWVLLG LLCLQIALGI SNVVLHLPLG
IAVSHNAGAA LLLLTLVFIN YALWRKA
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