| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0109 |
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| Symbol | |
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| ID | 4923008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 119619 |
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| End bp | 120665 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640161620 |
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| Product | response regulator receiver modulated CheB methylesterase |
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| Protein accession | YP_001092240 |
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| Protein GI | 127511043 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAAAG TATTGATCAT AGATGACTCA CCTCTGGTCA GGCAGCTGCT TACCCATATG
CTCTCACAGG CGCCGGATAT CAAGGTGGTC GCCACCGCCG AAGACCCCTA TGAGGCCAGG
AGCCTGATCA AGCAGTTCAA CCCAGATGTA CTGACATTGG ATATCGAGAT GCCCAAGATG
GACGGCATCG CCTTCCTGCG CAATCTGATG AAGCTCAGAC CCATGCCGGT CGTCATGGTC
TCGACCCTGA CCCACAAGGG CGCCGAGATC ACCCTGGAGG CGTTGGCCCT AGGCGCGGTG
GACTTCATCT CTAAGCCCAA GTCGGATCTC ACCAATACAT TGCTGGATTA TACCGATGAG
CTGATCGACA AGGTGCGCAC CGCCGCCGTC AGTCATGTTA AGCCGCTCAC CCGGCCGGTT
GTTCAGGTCG CTTCCAATAA TAAGTTCTCC CTTACGGGGG ACAAGTTGAT CGCCATCGGT
GCCTCGACCG GCGGAACCGA GGCGATCCAG CGGGTGATCA CCCCGCTGCC GGCAAATACG
CCGCCCATAG TGATCACCCA ACATATTCCC GCCGCCTTTA GCCTCTCCTT CGCCAAGCGA
CTGGACAGCC ATTCGGCGAT GAAGGTGATC GAAGCCAAGG GCGGCGAGCT CATAGCGTCA
GGCACCGCCT ATCTGGCCCC TGGGGATGCT CATCTCACGG TGGAGAAACA CGGCGCCAGG
CTCTATACCA AGCTACTGGA CTCAGATCCG GTCAATAGAC ATAAACCTGC TGTGGATGTG
TTATTCAACA GTATCGCCGA CTGCTTTGGT GCCAACACCA TAGGCATACT GCTGACGGGA
ATGGGAAAAG ATGGAGCCCT GGGGCTGGAA CGCCTCAAGG CTGCCGGCAG TCACACCATA
ATACAGGATG AGGCCAGCTC TGTGGTGTGG GGCATGCCGG GCGCCGCCGC CGAGCTCAAC
GCTCACAGAG AGATACTGCA TCTGGATAAG ATCCCCGCCC GGCTGATGCA GCTACTCAAT
ACCAGCAAGA CGGCGGAGAT CTCCTAG
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| Protein sequence | MIKVLIIDDS PLVRQLLTHM LSQAPDIKVV ATAEDPYEAR SLIKQFNPDV LTLDIEMPKM
DGIAFLRNLM KLRPMPVVMV STLTHKGAEI TLEALALGAV DFISKPKSDL TNTLLDYTDE
LIDKVRTAAV SHVKPLTRPV VQVASNNKFS LTGDKLIAIG ASTGGTEAIQ RVITPLPANT
PPIVITQHIP AAFSLSFAKR LDSHSAMKVI EAKGGELIAS GTAYLAPGDA HLTVEKHGAR
LYTKLLDSDP VNRHKPAVDV LFNSIADCFG ANTIGILLTG MGKDGALGLE RLKAAGSHTI
IQDEASSVVW GMPGAAAELN AHREILHLDK IPARLMQLLN TSKTAEIS
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