Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0100 |
Symbol | |
ID | 4920553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 110927 |
End bp | 111094 |
Gene Length | 168 bp |
Protein Length | 55 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640161611 |
Product | hypothetical protein |
Protein accession | YP_001092231 |
Protein GI | 127511034 |
COG category | [S] Function unknown |
COG ID | [COG0401] Uncharacterized homolog of Blt101 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00236491 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACCA ATAAACTTCT GCTGGTCATC ATCGCCATCC TGTTGCCACC GGTTGCCGTC TTCTTGAAGA GCGGTGTCGG CAAGGATCTG CTGATCAACA TCATTCTCTG CCTGCTGTTC TTTATCCCAG GCCTGCTGCA CGCCCTTTGG GTGGTGACTA AGTCTTAG
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Protein sequence | MDTNKLLLVI IAILLPPVAV FLKSGVGKDL LINIILCLLF FIPGLLHALW VVTKS
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