Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0093 |
Symbol | |
ID | 4922613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 105308 |
End bp | 105988 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640161604 |
Product | molybdate ABC transporter, inner membrane subunit |
Protein accession | YP_001092224 |
Protein GI | 127511027 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4149] ABC-type molybdate transport system, permease component |
TIGRFAM ID | [TIGR02141] molybdate ABC transporter, permease protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.30684 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTGGC AGGCGCTGCT GCTTTCAATC AAGTTAAGCT GTGTCACTGT GCTGGTGTTG ATCCCCTTTG CCATCTGGGC CGGTCGCTTC CTGGCGTACC GTCAGTTTAG AGGCAAGTCC TGGCTGGAGG CGCTGATTAT GGTGCCTCTG GTGTTGCCGC CGACGGTGAT CGGCTACTAC CTGCTGGTGG GGCTGGGCAG CCAATCCTGG CTGGGTCAGA CGTTAGAAGC CCTGCTGGGG CAGCAGCTGG TGTTCCATTT CTCTGGCCTG GTGGTGGCCT CAGTGCTGGT CAATATTCCC TTTGCCATAC AGCCGATTCA GCGCGCCTTC GAGTCTGTGC CCGAAGAGGT ACGCGACGCC GGTGCCTGCT GCGGCATGAG CCCGGCCAAG GTGTTGTTTA AGATAGAGCT GCCCCTGGTG TGGCCCGGTG TGCTAACCGC GCTGGTGCTC TGTTTCTCCC ATGTACTGGG CGAGTTTGGT GTGGTGTTGA TGATGGGCGG TAATATCGCC GGCGAGACCA AGACGATCGC CATCTCCATC TATGACAGCG TGCAGGCGTT CGATTTCGCC GCAGCTGGGC AGATGTCACT GTTGCTCCTG CTGTTTGCCA TTACCGCGTT GGCGCTCACC ACGAGCCTAT CCCGTCGATT AGGAGGCGTG AGTGTCTCAA GACGTCGCTG A
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Protein sequence | MDWQALLLSI KLSCVTVLVL IPFAIWAGRF LAYRQFRGKS WLEALIMVPL VLPPTVIGYY LLVGLGSQSW LGQTLEALLG QQLVFHFSGL VVASVLVNIP FAIQPIQRAF ESVPEEVRDA GACCGMSPAK VLFKIELPLV WPGVLTALVL CFSHVLGEFG VVLMMGGNIA GETKTIAISI YDSVQAFDFA AAGQMSLLLL LFAITALALT TSLSRRLGGV SVSRRR
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