| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0081 |
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| Symbol | |
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| ID | 4920550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 94873 |
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| End bp | 95607 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640161592 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001092212 |
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| Protein GI | 127511015 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAGATT TATCAACACA CTCCCACGAC GACTCACTCG ACATGAGCAT CAAAGTTGTA
CTCGTTGAAG ATGACGAAAA GATCAGCCAG CTGCTGTCCT CCTATCTGAC CATGCAGCAG
ATAGAGACAG TCTGTGTCCA TGATGGCGCC GACGCCGTCG CCACCATACT GGCCGAGCAG
CCGGATCTGG TCATCTTAGA TCTCATGTTG CCCAATCTGG ACGGTTTCAG CATCTGCCGT
CAGCTGCAAC CCGTCTTCGA TGGCAAGATA CTGTTTCTCA CCGCCAGCGA AGACGACATG
GATCAGGTGG CGGCACTGGA GATGGGCGCC GACGATTTCA TCATCAAACC GATACAGCCC
AGGGTCCTAC TGGCACGTAT CCGCATGCTG ATGCGCCGGG CCAAGGTGTC TGCTCCCCAG
GAGCAGCATC ATCTCAGCTT CGGCGAGCTT GAGCTCAATC AGCAGCGCAA GCAGTGTCTG
TTGGCGGGAG AAGAGATCAG CCTGACCACC AGCGAGTTCG ACCTGCTCTG GCTGCTGGCC
GCCCATGCCG ACGAGATCTT GACCCGGGAA TATCTGGTCA AACAGATCCG CGGCATAGAG
TACGACGGCA TCGACCGCAC CATAGACAAC AAGATAGTGG TGCTGCGCAA GAAGCTGGGC
GACAACCCCG CCCTGCCCCG GCGCATCATC ACCGTCAGGG CCAGGGGCTA TCTGTTTGTC
CCCGACCGTT GGTGA
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| Protein sequence | MLDLSTHSHD DSLDMSIKVV LVEDDEKISQ LLSSYLTMQQ IETVCVHDGA DAVATILAEQ
PDLVILDLML PNLDGFSICR QLQPVFDGKI LFLTASEDDM DQVAALEMGA DDFIIKPIQP
RVLLARIRML MRRAKVSAPQ EQHHLSFGEL ELNQQRKQCL LAGEEISLTT SEFDLLWLLA
AHADEILTRE YLVKQIRGIE YDGIDRTIDN KIVVLRKKLG DNPALPRRII TVRARGYLFV
PDRW
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