| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0068 |
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| Symbol | |
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| ID | 4921806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 80976 |
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| End bp | 82355 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640161580 |
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| Product | fumarate lyase |
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| Protein accession | YP_001092200 |
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| Protein GI | 127511003 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0114] Fumarase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAGTA AAGCGGTAAG CGACAGCATG GGCGACCTCA ATATTCCCGC CGATGCCCTC
TACGGCGCGC AGACGGCGCG GGCGATCAAG AACTTTCCCG TGAGTGGTCG TCCCATGCCC
CGCAGCTTCA TCCGTGCCTT GTTGCTGGCT AAGCTTGCCG CCGTCGAGGC CAACGTGGCA
CTTAGACTGC TGCCGCCCAA TATTGCCCCG GCGGTCGCCC AGGCGGTGCA GGAGCTGCTG
GCGGATCCCC AGATGATGCG CCATTTTCCC ATCGACATGT TTCAAACTGG CTCGGGCACC
AGCAGCAACA TGAACGCCAA CGAGGTGCTC GCGACCCTGG TCTCGAAGAG CCTGGGTCAG
GCGGTGCATC CCAACGATGT GATTAACCTG GGGCAGAGCA GCAACGACAT CATTCCCAGC
ACTATCCATA TCAGCGCCCT GCTGGCGGTA GAGCAGTCGC TGCTCCCCTC GTTAACCCTG
CTGTCGCAGA CCATCACCAC TAAGGCACAG CAGCTGGCCG ATGTCACCAA GACGGGGCGA
ACCCACCTGA TGGATGCCAT GCCGGTGCGT TTCGATCAGG TGTTGGGGGG CTGGGCGAGT
CAGATCGATG ATTGCCGCGA GCGGATCGCC AGCCAAGGCG ACGCCCTGGC CCAGCTGCCC
GTGGGCGGCA CGGCGGTGGG GACAGGGGTC AACACCCACG AGGAGTTCTC CCGGCTGTTC
TGCGAGAGAC TCAGCGCCCT GACCCGCACC CAGTTTCGTC CGGCGGATAA TCTGTTTAGC
CGCATGGCAA GCCATGATAC CGCCGTCGCC CTCTCGGGCC AGCTGAAGAC GCTGGCGGTG
GCCATCATGA AGATCAGCAA CGACCTGCGC TGGATGAACT CCGGCCCACT GGCGGGCCTG
GGTGAGATTA GCCTGCAACC TTTGCAGCCG GGCTCCTCCA TCATGCCGGG CAAGGTCAAC
CCTGTGATCC CCGAGTCCGC CTGCATGGTG GCGGCCCAGG TGATGGGTAA GGATATGGCG
ATCACTATCG CTGGTCAGTC CGGTAACTTC GAGCTCAACG TGATGCAGCC GCTTATTGCG
GTTAACCTAC TAGAGAGCAT AGAGATCCTC AGCAATGTCT CGCGCCTCCT GGCGGATAAG
GCGATTGCGA GTTTCGTGGT GAATCGAGGC AAGATAGCCG ACTCACTGCA TCGCAATCCC
ATACTGGTGA CCGCACTAAG CCCCAAGGTG GGCTATGTGC AGGCCGCTAA GATAGTCAAG
CAAGCCTATC AGGAGCAGAG GCCCATACTC GAGGTCGCCA TGGAGCTCAC AGACCTTAGC
GAGGAGGAGC TCAGGCGCCT GCTGGATCCC GAACGCCTGA CCCGCGGCGG TCTGGCGTAG
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| Protein sequence | MESKAVSDSM GDLNIPADAL YGAQTARAIK NFPVSGRPMP RSFIRALLLA KLAAVEANVA
LRLLPPNIAP AVAQAVQELL ADPQMMRHFP IDMFQTGSGT SSNMNANEVL ATLVSKSLGQ
AVHPNDVINL GQSSNDIIPS TIHISALLAV EQSLLPSLTL LSQTITTKAQ QLADVTKTGR
THLMDAMPVR FDQVLGGWAS QIDDCRERIA SQGDALAQLP VGGTAVGTGV NTHEEFSRLF
CERLSALTRT QFRPADNLFS RMASHDTAVA LSGQLKTLAV AIMKISNDLR WMNSGPLAGL
GEISLQPLQP GSSIMPGKVN PVIPESACMV AAQVMGKDMA ITIAGQSGNF ELNVMQPLIA
VNLLESIEIL SNVSRLLADK AIASFVVNRG KIADSLHRNP ILVTALSPKV GYVQAAKIVK
QAYQEQRPIL EVAMELTDLS EEELRRLLDP ERLTRGGLA
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