| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0067 |
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| Symbol | |
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| ID | 4921457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 80252 |
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| End bp | 80761 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640161579 |
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| Product | hypothetical protein |
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| Protein accession | YP_001092199 |
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| Protein GI | 127511002 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGTAA CCATGAGACA TAAAGGAGCC TCTGGCTTTA CCCTGATAGA GATGGTGGTG
GTGATCATCA TACTGGCCAT TCTCAGCGTA GCGGCCGCCA GCAGGTGGAT AAGCCTGACG
CGAGAGGCGA GGATCGCCCA GCTCAAGCAG CTTGAGGCCT CGGTGCAGGC CGCGAATCAA
CTTGTCTATG CCCGCTCGGC CATCCTGGGG CTAGAGAAGC AGCCTAAGGC CAGCTTCTTC
CTCAACCCAG GCGATAGCCA AAAAATCCAG GTGAGATATG GCAACCCGGT ATGGGGCGGC
GATGCGGTAA CTCAGCTGTT GACGGTCACC ATGAGTGAAT GGTTCTATGG CGGGCGCTGG
ACGGTGGAAG ATATCGAGCT GCGCATCGGC GATCGCAGCC TATATAAGAC CCCTGGAGAT
CTCATGGCAG ACGGCGCCCT CGCCTGCTAT TTGAGGGTCG ACACGACTGC CGATAGCGTG
ACCACCAAAA TCATGGACAA CGACTGTTAA
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| Protein sequence | MRVTMRHKGA SGFTLIEMVV VIIILAILSV AAASRWISLT REARIAQLKQ LEASVQAANQ
LVYARSAILG LEKQPKASFF LNPGDSQKIQ VRYGNPVWGG DAVTQLLTVT MSEWFYGGRW
TVEDIELRIG DRSLYKTPGD LMADGALACY LRVDTTADSV TTKIMDNDC
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