| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0060 |
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| Symbol | |
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| ID | 4921927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 72749 |
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| End bp | 73339 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640161572 |
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| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
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| Protein accession | YP_001092192 |
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| Protein GI | 127510995 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGTCA TGAAATTTCT ATGTGACACC AAACGCTGCA TCGAGTGTAA CGGTTGCGTC
ACAGCATGTA AGAACGAAAA CGATTCCGCT CTCGAGTGGG GTATCCAACG CCGTCGCGTC
GTGACCATCA ACGATGGTCA ACCCGGTGAA GCCTCGATCT CTGTGGCTTG TATGCACTGT
ACCGACGCCC CTTGTCAGGC CGTTTGCCCA GCAAACTGCT TCTACAAGAC GGAAGATGGC
CTAACACTAC ACAACAAAGA TACCTGTATC GGTTGTGGTT ACTGCCTATA CGCCTGCCCA
TTCGGTGCGC CTCAGTTCCC TAAGAAGAGC ACCTTTGGCA GCCGCGGCAA GATGGACAAG
TGTACTTTCT GTGCCGGTGG CCCAGAAGAG ACCTTCTCCG AAGCCGAGCG TAAGAAGTAT
GGCGCTAACC GTCTGGCCGA GGGTAAGTTA CCTATGTGTG CCGAGCTTTG TTCAACCAAG
GCACTGCTCG CTGGTGATGC GGAAGTGGTT TCCAACATCT ACCGTGAGCG TATTGCGGCC
CGTGGTAACC CCAATGCGAT CTGGGGCTAC ACCCCTAAGA CTGGCGTTTA A
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| Protein sequence | MAVMKFLCDT KRCIECNGCV TACKNENDSA LEWGIQRRRV VTINDGQPGE ASISVACMHC
TDAPCQAVCP ANCFYKTEDG LTLHNKDTCI GCGYCLYACP FGAPQFPKKS TFGSRGKMDK
CTFCAGGPEE TFSEAERKKY GANRLAEGKL PMCAELCSTK ALLAGDAEVV SNIYRERIAA
RGNPNAIWGY TPKTGV
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