| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0059 |
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| Symbol | |
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| ID | 4921053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 69872 |
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| End bp | 72721 |
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| Gene Length | 2850 bp |
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| Protein Length | 949 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640161571 |
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| Product | molybdopterin oxidoreductase |
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| Protein accession | YP_001092191 |
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| Protein GI | 127510994 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing
[COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.65892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTAA CCCGCAAAAC AGACCAGGCA GAAGTCGCTA AAAAGCCTGC CCTGGGTCTA
AGTCGTCGTC AGTTCCTTCA GTCTGCAGGT CTTGCTACTG GTGGTATTGC CGCGGCCTCT
ATGCTTGGCG CTGGAATGAT GCGCAAAGCC GAAGCGAAAG AAGTGCCACA TGATGCGCCA
ACCGAAGTGA AGCGTACCAT CTGTTCTCAC TGTTCAGTGG GCTGTGGTAT CTATGCCGAA
GTACAAAATG GTGTGTGGAC AGGCCAAGAG CCAGCTTTCG ACCATCCATT CAATGCCGGT
GGCCACTGTG CCAAGGGTGC GTCTCTGCGT GAGCACGGCC ATGGTGAGAA GCGTCTCAAG
TACCCCATGA AGCTCGAAGG CGGTAAGTGG AAGCGTATCT CTTGGGATCA GGCTATCGAG
GAAGTGGGCC AGAAGGCACT GGATATCCGT AAGGAATCGG GCCCGGATTC AATCTTCTTC
ATGGGTAGTG CTAAGTTCTC TAACGAGCAG GCTTACCTCT ACCGTAAATT CGCTGCCATG
TGGGGCACCA ACAACGTCGA CCACTCGGCA CGTATTTGTC ACTCTACCAC TGTAGCCGGT
GTTGCCAACA CCTGGGGCTA TGGTGCGCAA ACCAACTCGT TCAACGATAT CCGCAACGCC
AAGGCGATGA TGTTTATCGG TTCTAACCCT TCAGAAGCTC ACCCGGTTGC CATGCAACAC
ATTCTGGAAG GTAAAGAGCG CGGCGCGAAG ATTATCGTTG TCGATCCTCG TTTCACCCGT
ACTGCGGCTA AGGCCGACGA GTACGTGCAT ATTCGCCCAG GTACCGATAT TCCTTATATC
TACGGTCTAC TGTGGCATAT CTTCGAAAAC AAGTGGGAAG ACCAGACCTT CATCGATCAG
CGTGTCTACG GCATGGAGCG TATCCGCGAA GCTGCCGCTA AGTGGAACCC TGAAGAAGTT
GAAAACGTGG TCGGTGTACC GAAAGAGCAG ATGTACCGTG TGGCCAAGAC ACTGGCCGAG
ACTAAGCCTG GCACCATAGT CTGGTGTATG GGTGGTACTC AGCACCACAT AGGTAATGCC
AACACCCGCG CTTACTGTAT CCTGCAGTTG GCCCTGGGTA ATATGGGCGT TTCTGGTGGC
GGTACTAACA TCTTCCGTGG TCACGATAAC GTACAGGGCG CAACCGACTT CGGTCTGCTG
TTCGACACCC TGCCTGGTTA CTATGGCCTC AAGACAGGTT CTTGGAAGCA CTGGTGTAAC
GTATGGGATC TGGACTATGA GTGGGTGAAG GCTCGCTTCG ACCAGGAACA GCGTTTGGGT
CAGGATCCTA TGACCTCTAC CGGTATTCCT TGTTCTCGTT GGCACGACGG CGTGCTGGAA
GACAAGTCTA AGATCGCTCA GAAAGACAAC ATCCGTATGT CATTCTTCTG GGGTCAGTCG
GTTAACACAG AAACCCGTGG CCGTGAGGTG CGTGAAGCAC TGAACAAGAT GGACACTGTA
GTGGTTGTGG ATCCATTCCC AACCATGGCG GGTGTGATGC ATACCCGTAA AGATGGCGTC
TATCTGCTGC CAGCGGCGAC TCAGTTCGAA ACCTATGGTT CGGTATCTGC CTCTAACCGC
TCACTGCAGT GGCGTTCACA GGTTATTGAG CCGCTGTTCG AATCTAAGCC TGACCACGTC
ATCATGTACA AGTTGGCGAA GAAGTGGGGC ATAGAGAAAG AACTGTGTAA GCATATCCAG
GTGAATGGCG ACGAGCCGTT GATCGAAGAT ATTGTCCGTG AATACAACAA GGGTATGTGG
ACCATCGGTT ACACAGGTCA GAGCCCAGAG CGTCTCAAGA TGCACCAGGA AAACTGGGGC
ACCTTCGACA TCAAGAGCCT GGAAGCACCG GGTGGCCCAG CTAAGGGTGA AACCTACGGT
CTGCCTTGGC CATGTTGGGG CACACCTGAG ATGAAGCACC CAGGTACCCA GATCCTCTAC
CGTACCGACC GTGAAGTCCG CTTCGGTGGT GGTAACTTCC GTGCCCGTTA CGGTGTTGAG
CACGATGGTA ACAACATCCT GGCCGAAGGC TCTTACTCTA AGGGCAGTGA GATCAAGGAC
GGTTACCCAG AGTTTACCGA CAAGATGCTT AAGCAGCTTG GCTGGTGGGA CGACCTGACC
GCAGAAGAGA AAGCCGCTGC CGAAGGCAAG AACTGGAAGA CAGATATCTC TGGTGGTATC
CAGCGTGTCG CCATCAAGCA CGGTTGTATC CCATTTGGTA ACGCTAAGGC CCGTTGTATC
GTTTGGAACT TCCCTGATGA TATTCCGGTT CACCGTGAGC CTCTGTATAC GCCTCGTCGC
GATCTTGTGT CTAAGTACCC AACTTACGAT GACCGTATGG TTGCGCGTCT TCCTACCCTG
TACAAGTCAA TTCAGGATCA GGACTTCGCC AAAGAGTTCC CACTCGCCTT GACCTCTGGT
CGTCTGGTTG AGTACGAGGG CGGTGGTGAA GAGACACGTT CTAACCCTTG GTTGGCAGAG
CTTCAGCAAG AGATGTTTAT CGAAATCAAC CCTGCTGATG CGGCGGATCG TGGTCTACGT
GATGGCGATG TCGTATGGGT TCACAGCCCA GAAGGCGCCA AGATCAAAGT GCAGGCAATG
GTGACACCGC GTGTGATTGA AGGCGAGTGT TTCATGCCGT ACCACTTCGC GGGTATGTTC
GAAGGCGAGA GCCTGGAGAA GAGCTACCCA GAAGGTACAG TGCCTTACAT CATTGGTGAG
TCGGCCAACA CCGTATTGAC CTATGGCTAT GACGTGGTGA CCCAGATGCA AGAGACTAAG
TCTAGCTTGT GTCAGATCAC TAAAGCCTAA
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| Protein sequence | MRLTRKTDQA EVAKKPALGL SRRQFLQSAG LATGGIAAAS MLGAGMMRKA EAKEVPHDAP
TEVKRTICSH CSVGCGIYAE VQNGVWTGQE PAFDHPFNAG GHCAKGASLR EHGHGEKRLK
YPMKLEGGKW KRISWDQAIE EVGQKALDIR KESGPDSIFF MGSAKFSNEQ AYLYRKFAAM
WGTNNVDHSA RICHSTTVAG VANTWGYGAQ TNSFNDIRNA KAMMFIGSNP SEAHPVAMQH
ILEGKERGAK IIVVDPRFTR TAAKADEYVH IRPGTDIPYI YGLLWHIFEN KWEDQTFIDQ
RVYGMERIRE AAAKWNPEEV ENVVGVPKEQ MYRVAKTLAE TKPGTIVWCM GGTQHHIGNA
NTRAYCILQL ALGNMGVSGG GTNIFRGHDN VQGATDFGLL FDTLPGYYGL KTGSWKHWCN
VWDLDYEWVK ARFDQEQRLG QDPMTSTGIP CSRWHDGVLE DKSKIAQKDN IRMSFFWGQS
VNTETRGREV REALNKMDTV VVVDPFPTMA GVMHTRKDGV YLLPAATQFE TYGSVSASNR
SLQWRSQVIE PLFESKPDHV IMYKLAKKWG IEKELCKHIQ VNGDEPLIED IVREYNKGMW
TIGYTGQSPE RLKMHQENWG TFDIKSLEAP GGPAKGETYG LPWPCWGTPE MKHPGTQILY
RTDREVRFGG GNFRARYGVE HDGNNILAEG SYSKGSEIKD GYPEFTDKML KQLGWWDDLT
AEEKAAAEGK NWKTDISGGI QRVAIKHGCI PFGNAKARCI VWNFPDDIPV HREPLYTPRR
DLVSKYPTYD DRMVARLPTL YKSIQDQDFA KEFPLALTSG RLVEYEGGGE ETRSNPWLAE
LQQEMFIEIN PADAADRGLR DGDVVWVHSP EGAKIKVQAM VTPRVIEGEC FMPYHFAGMF
EGESLEKSYP EGTVPYIIGE SANTVLTYGY DVVTQMQETK SSLCQITKA
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