| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0034 |
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| Symbol | |
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| ID | 4920480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 39701 |
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| End bp | 40504 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640161546 |
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| Product | methyltransferase type 12 |
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| Protein accession | YP_001092166 |
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| Protein GI | 127510969 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCGCG CAGTGGATTA TCTGACCCTA AATCGAACGG CCTGGAATCA CAGGACCCTA
GAACATCTAG ACTCTAGCTT CTACGATGTA AGTGGCTTTC TCGCCGGCAA CAGCTCGCTG
CAGGAGATAG AGCTAGCCGA CCTTAAGGTA AAGGGAAAAA GCCTACTGCA CCTACAGTGC
CATTTCGGCC TGGACACTCT CTCCCTGGCT CGCCTCGGCG CCGAGGTCAC TGGCGTGGAT
CTCTCCGACA CCGCCATCCA TCATGCCAGG CGACTGGCCG AGGCCTGCGA CCTTAAGGCC
GACTTTATCT GCAGCGATCT CTACCAAGCG GGCACGCAGC TGCAGCAGCA GTTCGATATG
GTCTACACCT CCTATGGCGC CCTCTGCTGG CTGCCGGATC TAGGTCGTTG GGCAGAGTTG
ATTTATGAGT CGCTGCTACC CGGTGGTGAG TTTTATATGG TGGAGTTTCA TCCCGTGCAG
GCAATGATGG AGGGTTACAG TTATTTTACC CAGCAGGAGC CGGATGTTGA GGAGGAAGGC
ACCTATACGG AAAACGCCAG CGACACCAAA CACACCATGG TGACCTGGCC CCACTCCCTG
GCCGATGTGA TAGGGGCGCT CATCCAAGCC GGACTCAAGG TAGAGGCGAT TCAGGAGTAT
CCCTTCAGCC CCTATGATGC CTTCGACAAT CTGGTGACGG GAGAGAGCCT AGGGCTCTCA
AGCGACAGGC CCAGGTATTA TCAGCTACAT CAGGGCAAGC CGATCCCTAT GGTCTACAGC
CTGTCGGCCC GTAAACCTGA GTAA
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| Protein sequence | MRRAVDYLTL NRTAWNHRTL EHLDSSFYDV SGFLAGNSSL QEIELADLKV KGKSLLHLQC
HFGLDTLSLA RLGAEVTGVD LSDTAIHHAR RLAEACDLKA DFICSDLYQA GTQLQQQFDM
VYTSYGALCW LPDLGRWAEL IYESLLPGGE FYMVEFHPVQ AMMEGYSYFT QQEPDVEEEG
TYTENASDTK HTMVTWPHSL ADVIGALIQA GLKVEAIQEY PFSPYDAFDN LVTGESLGLS
SDRPRYYQLH QGKPIPMVYS LSARKPE
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