| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0029 |
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| Symbol | |
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| ID | 4920528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 31239 |
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| End bp | 31928 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640161541 |
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| Product | 3-methyladenine DNA glycosylase |
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| Protein accession | YP_001092161 |
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| Protein GI | 127510964 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2818] 3-methyladenine DNA glycosylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.176771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGAT TAGAATCGTT CGACAGTATT TACCAGCGCG CCTGTGAGCG CAAAGGCGGC
GAAGCAGGCT TGGCCGCTCG TCTGCCAGAG GTGTTATCTC AGGATCAGAT TGCCGAGTAT
ACGGATGCCG AGCTGCTGTC TGAGCTGAGT AAGAAGGTGT TTCAATCGGG ATTTGTATGG
CGCATCGTCG ACAACAAGTG GCCAGCCTAT GAGGCGGCCT TCTTCAACTT CGAGCCCCAC
AAGATCTTGA TGCTATCGCC TGAGCAGATC CAGCAGCGTG CCAGCGACCC CGAGTTGATC
CGCCACCTGA AGAAGACCAT GGCGATATAT GACAACGCTC TGATGGTGCA TGATATTAAG
CTCGCTCACG GCAGCTTTGC CAAGTTTATT GCTCAGTGGC CCAGCGATAA TATCATAGGG
CTCTGGGCCG AGCTGAAACG CCTGGGCTGC CGACTGGGTG GCAATACCGG CCCCTATTTT
CTGCGCACCA TAGGCAAAGA TACCTTTCTG CTGACCGAAG ATATCAAGGG ATATCTTCAG
GCCCACAAAC TGATCGATGC CGGTTTTACC TCTACACGAG GCCTGACCCA GGTGCAGGAA
GTATTCAATG AGTGGCAGGC ACAGTCGGGC CGCTCTCTGG CGGAAATCAG CCGTATCCTC
GCCTGTGGCG TGGGTGATAA CCGGATATAA
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| Protein sequence | MARLESFDSI YQRACERKGG EAGLAARLPE VLSQDQIAEY TDAELLSELS KKVFQSGFVW
RIVDNKWPAY EAAFFNFEPH KILMLSPEQI QQRASDPELI RHLKKTMAIY DNALMVHDIK
LAHGSFAKFI AQWPSDNIIG LWAELKRLGC RLGGNTGPYF LRTIGKDTFL LTEDIKGYLQ
AHKLIDAGFT STRGLTQVQE VFNEWQAQSG RSLAEISRIL ACGVGDNRI
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