| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0021 |
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| Symbol | |
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| ID | 4921130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 24832 |
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| End bp | 25446 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640161533 |
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| Product | hypothetical protein |
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| Protein accession | YP_001092153 |
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| Protein GI | 127510956 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1739] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00257] uncharacterized protein, YigZ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0775164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAGCGAGA GTTATCCCAT TCCGGCCAAG CCGATCACCA TAGAAGAAGA GATAAAGCAT
AGCCGCTTTA TCTCTTTTCT ATTTCACTGC CCATCGGAAG ATGTGTTGAA GTGTGTGCTC
ACTAACATTA AGGCCGAGTA TCCGGGGGCG AATCACTATT GCTACGCCTT TATCGCCGGA
GCGCCGGACA ATAATGTGGC CATGGGCAGC AGCGATGATG GTGAGCCGTC CGGCAGTGCC
GGGCGTCCCA TGTTGGCCAG CCTGCAGGGT GCCGAGATAG GTGAGATCGG CGCCGTCGTG
GTGCGCTATT TTGGCGGCAC CAAGTTAGGT GTCGGCGGCC TGGTGCGCGC CTACAGCTCT
GGCATCAAAC AGGGGCTGGC GCAGCTAGAG ACTGAGATAA AGCAGATCCG TTATCCTGGA
AGGCTGGCGT GCGATTACCA TCAGCTCAAA GATGTGGAAC ACTTTCTCGA GCTCTGTGAG
GGGCTGGTTG TCGACAAGGT GTTTACCGAC AGGGTGAGCC TGAGTTTCGA GATGCCCAAG
GCGACTCAGA GCCGTTTCAA TCAGGAGCTT GCGACCCTGA GTCAGGGACG CCTCAAGGCG
GAGTTTTCCA ACTGA
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| Protein sequence | MSESYPIPAK PITIEEEIKH SRFISFLFHC PSEDVLKCVL TNIKAEYPGA NHYCYAFIAG
APDNNVAMGS SDDGEPSGSA GRPMLASLQG AEIGEIGAVV VRYFGGTKLG VGGLVRAYSS
GIKQGLAQLE TEIKQIRYPG RLACDYHQLK DVEHFLELCE GLVVDKVFTD RVSLSFEMPK
ATQSRFNQEL ATLSQGRLKA EFSN
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