| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0012 |
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| Symbol | |
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| ID | 4923184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 13179 |
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| End bp | 13859 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640161524 |
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| Product | hypothetical protein |
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| Protein accession | YP_001092144 |
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| Protein GI | 127510947 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0157701 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATCCC TAAAACTTCC CCTACTCATA TTATTATCCG CCTCGGCCAT CGCCTATTTG
ATGCTAGAGG CAGACCATGC TCAGCCAAGA GATGAGCCAA AGATTCCCAT CGCTCAAGCT
GACCAGGACA GGAGTGCTCA ACGTCAGTCT CCGGCCCAGA CTCAAACAGA CAGCAAGGTA
GAAACAGAAA GCCTTGTGAG TGACACAGAC AACGGTAATA AGGTCGATAC AGATACACCC
GAATGGAATG AGGTAGAGGT AGAGGAAGAC AAGCAGACCT CGGCCAAGCT GCTGGTGGCT
CAAATCATTG ACGCGCAGGG GGTCGTTGAT GGTGAGCAGA TTAAAAAGCT ATTTGATGAA
GACCTGGAAG CCTATGTCGA TCTCATCGAG TCCCTCGACA ACCATGATGC CACCAGCCAA
CAGCGCCAGA CGGCTCTGGC AGACAGACTC ACCCATTTGC CAGAGACCAT ATACAGTGAA
AAATATGCCT GCGGAGACAG AATCTGCGTC CTAAGCCTTA CAACGGACAC TATCAGCCAA
CAAAGTATTG ATAAATTGAG TGAATTTGAT AAAAACTACG CATTTATCAA GCAGACTCAA
CTCGACACAG GTGAGACACA GTTTCAGGCC ATCTACCTAC AGACAGATGA CCCTTCCACC
ATGCGCTTTA AAGGTTACTA A
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| Protein sequence | MKSLKLPLLI LLSASAIAYL MLEADHAQPR DEPKIPIAQA DQDRSAQRQS PAQTQTDSKV
ETESLVSDTD NGNKVDTDTP EWNEVEVEED KQTSAKLLVA QIIDAQGVVD GEQIKKLFDE
DLEAYVDLIE SLDNHDATSQ QRQTALADRL THLPETIYSE KYACGDRICV LSLTTDTISQ
QSIDKLSEFD KNYAFIKQTQ LDTGETQFQA IYLQTDDPST MRFKGY
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