Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0010 |
Symbol | glyQ |
ID | 4923915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 11589 |
End bp | 12494 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640161522 |
Product | glycyl-tRNA synthetase subunit alpha |
Protein accession | YP_001092142 |
Protein GI | 127510945 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0752] Glycyl-tRNA synthetase, alpha subunit |
TIGRFAM ID | [TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00552655 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGACGA AACATGACGT AAAAACATTC CAGGGTTTCA TCTTAACCCT GCAGGAATAC TGGGCGCAGC AAGGTTGCGC TATCGTTCAA CCGCTGGACA TGGAAGTAGG CGCGGGCACT TTCCACCCTA TGACCTTCTT GCGTTCTCTT GGCCCTGAGC CGATGAGCAG CGCCTATGTT CAGCCATGTC GTCGTCCTAC CGATGGTCGT TACGGTGAAA ACCCTAACCG TCTGCAACAC TACTACCAGT TCCAGGTAGT ACTTAAGCCG TCGCCAAGCA ATATCCAGGA ACTCTACCTG GGTTCTCTTG AAGCCTTGGG TGTCGACATG AATATTCATG ACGTACGCTT CGTGGAAGAC AACTGGGAAT CTCCGACTCT GGGTGCCTGG GGACTGGGCT GGGAAGTCTG GCTAAACGGC ATGGAAGTGT CTCAGTTTAC CTACTTCCAG CAGGTTGGTG GCCTGGAGTG TAGCCCTGTG ACAGGTGAGA TCACCTATGG TCTAGAGCGT CTGGCCATGT ATATCCAGGA AGTTGACAGC GTCTATGATC TGGTGTGGAC CGACGGCCCT ATGGGCAAGA TCATGTACGG CGATGTGTTC CATCAAAACG AGGTTGAGCA ATCGACCTAT AACTTCGAAC ACGCCAACGT AGAAGTACTG TTCAAGCAGT TTGACGACTG CGAGAAAGCC TGTAACGAGC TGCTAGCACT CGAGACGCCA CTGCCCTTGC CTGCCTATGA GCAGGTGATG AAAGCCTCTC ACGCCTTCAA CCTACTCGAT GCCCGTCATG CTATTTCGGT CACCGAGCGT CAGCGCTATA TTCTGCGTGT GCGCACCATG GCCAAGTCAG TGGCTGAGTC CTATTACCAA GCCCGTGAAG CACTCGGCTT CCCAATGTGT AAGTAG
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Protein sequence | MTTKHDVKTF QGFILTLQEY WAQQGCAIVQ PLDMEVGAGT FHPMTFLRSL GPEPMSSAYV QPCRRPTDGR YGENPNRLQH YYQFQVVLKP SPSNIQELYL GSLEALGVDM NIHDVRFVED NWESPTLGAW GLGWEVWLNG MEVSQFTYFQ QVGGLECSPV TGEITYGLER LAMYIQEVDS VYDLVWTDGP MGKIMYGDVF HQNEVEQSTY NFEHANVEVL FKQFDDCEKA CNELLALETP LPLPAYEQVM KASHAFNLLD ARHAISVTER QRYILRVRTM AKSVAESYYQ AREALGFPMC K
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