| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0007 |
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| Symbol | |
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| ID | 4922270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 7793 |
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| End bp | 8725 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640161519 |
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| Product | urea amidolyase related protein |
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| Protein accession | YP_001092139 |
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| Protein GI | 127510942 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1984] Allophanate hydrolase subunit 2 |
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| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00148703 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGCGGC TCGATAGGGT AAACGGCCTA GCCAGCATTC AAGACCTTGG CAGGCAGGGA
CAGGGGCACC TAGGCATACC AAGCGGTGGC GCCATGGATA GCTTCTCGCT GATCCTGGCC
AACCGCCTGC TGGGCAATGA GGATAACGCC CCCGCCATCG AGCTCGCCAG TGGCAGCTAT
GAGTTCACCT TCAAGACCCC GAGCTGGGTC GCCCTGTGCG GCGCCAGCTT CGAGGCCAAG
ATAGATGATC GTCCCCTGTG GCACAGCTGG CGCGGCCGGG TGAATCCGGG GGAACGCCTG
ACGCTGAAGG GACCGAGACA AGGCGTGTGG GGCTACCTGG CAATCCTCGG CGGTATCGAG
GTCCCCGAGG TTCTCGGAGG TCACGGCACC TTCCTGGCAG GACGGTTCGG TGGCCATCAG
GGGCGACAAC TCGCCTCGGG CGATACTCTT AGCCTGAATC CCCATACTGA AGCAAACTTC
AGTCGCCCGG TCGGTGCGGT GCACAGGGCC AACGACGGCA TACTGCGCGC CCTCCCCGGG
CCAGAGATGA GCCAGTTCAG CGATCAGGAT CGCAAGGCCT TCTGGCATGG CCACTGGACC
GTTTCGCCCC AGAATGATCG CATGGGCGCC CGGTTGACAG GCGAGTCTCT GGACTCTGGT
AAACATCTGA GTCTGCGCTC CCACGCCGTG CTACCGGGCG TGGTTCAGGT GCCGCCGGGT
GGCCAACCTA TAGTGCTACA GGCCGATGCC CAAACCAGCG GCGGCTACCC GAGAATGGCC
ATGGTGATCG AGGCCGACCG CTGGAAACTG GCCCAGGCCA GAGCAGGGCA AGCGATCCGC
TTTCAGCATG TCAGCCCCAA TCAGGTGGAA GATGCTAACC TTGAATGGCA ACACTATTTC
TATCGCTTAG CGAGGGCAAT GGATGGGAGT TAA
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| Protein sequence | MMRLDRVNGL ASIQDLGRQG QGHLGIPSGG AMDSFSLILA NRLLGNEDNA PAIELASGSY
EFTFKTPSWV ALCGASFEAK IDDRPLWHSW RGRVNPGERL TLKGPRQGVW GYLAILGGIE
VPEVLGGHGT FLAGRFGGHQ GRQLASGDTL SLNPHTEANF SRPVGAVHRA NDGILRALPG
PEMSQFSDQD RKAFWHGHWT VSPQNDRMGA RLTGESLDSG KHLSLRSHAV LPGVVQVPPG
GQPIVLQADA QTSGGYPRMA MVIEADRWKL AQARAGQAIR FQHVSPNQVE DANLEWQHYF
YRLARAMDGS
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