Gene P9301_18971 details

Gene Information

• Locus tag: P9301_18971
• Symbol: rpsF
• ID: 4912514
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9301
• Kingdom: Bacteria
• Replicon accession: NC_009091
• Strand: +
• Start bp: 1628358
• End bp: 1628819
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 640161503
• Product: 30S ribosomal protein S6
• Protein accession: YP_001092121
• Protein GI: 126697235
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0360] Ribosomal protein S6
• TIGRFAM ID: [TIGR00166] ribosomal protein S6

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.637198
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGATC AACAATCTTA TTACGAAACG ATGTATATCC TCCGTCCAGA TATTGCGGAA 
GATGAAGTAA CTACCTACAT TGATAAATAC AATAAGCTTT TAGAAGAATT TGGTGGCACC 
ATCCTCGATA GTCAAATGAG GGGTAAAAGA AGATTAGCCT ATCAAATAGC AAAACATAGA 
GAAGGTATTT ACGTCCAGCT AAGTCATCAA GGAGATGGAC AACATATTTT CAAAATCGAA 
AAAGCAATGA GACTAAGTGA AGATGTTATA AGATACATGA CCGTTAAACA AGAAGGGCCC 
TTGCCAACTC CAAGACCTTC TTCGAAAAGT TCAACTAAAG CAGATGATAA AGAAAATCCA 
GAAACTAAAG TTGAACCTAA GGAAGAACAA CCAGTAATAA GCGCAAATAC TTCAACTTCA 
GAAAAAGATG ATACTGAAAC CAGAGAAAAT GCAGAATCTT AA 

 

Protein sequence

MNDQQSYYET MYILRPDIAE DEVTTYIDKY NKLLEEFGGT ILDSQMRGKR RLAYQIAKHR 
EGIYVQLSHQ GDGQHIFKIE KAMRLSEDVI RYMTVKQEGP LPTPRPSSKS STKADDKENP 
ETKVEPKEEQ PVISANTSTS EKDDTETREN AES