Gene P9301_18461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9301_18461 
Symbol 
ID4911048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9301 
KingdomBacteria 
Replicon accessionNC_009091 
Strand
Start bp1571500 
End bp1572144 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content34% 
IMG OID640161451 
ProductClp protease proteolytic subunit 
Protein accessionYP_001092070 
Protein GI126697184 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACTCAG AAAAAAAACA TTTAATCCAA AGCTCAATAA GTTCTTACGA AAGTAATAAT 
AAAACTATTG CTGCTGTTCC TACTGTTATA GAACAATCAG GTAGAGGAGA AAGAGCTTTT
GATATATATT CAAGATTATT GAGGGAGAGA ATAATTTTTT TAGGTACTGG AATAAATGAT
CAAGTTTCTG ACTCACTTGT TGCACAATTA TTATTTCTTG AAGCTGAAGA TCCTGAAAAA
GACATACAAA TATATATCAA TTCTCCTGGA GGCTCAGTAA CCGCAGGAAT GGCCATTTAC
GATACTATGC AACAAATATC TCCAGATGTA GTGACAATAT GCTTTGGAGT AGCTGCAAGT
ATGGGGGCAT TTCTACTTTC TGGAGGAGCA AAGGGGAAAA GATTGGCTTT ACCTAATTCT
AGAATTATGA TTCATCAGCC TCTTGGAGGT GCACAAGGTC AAGCAGTAGA GATAGAAATA
CAAGCTAAAG AGATACTTTT TCTAAAGAAA ACATTAAATT CGCTTTTAGC CGAACATACC
GGTCAACCTT TAGAAAAAAT TAATGAAGAT ACAGAAAGAG ATTACTTTTT ATCTCCCTCA
GAAGCAGTCG AATATGGATT AATTGATAAA GTTATCAAAA AGTGA
 
Protein sequence
MNSEKKHLIQ SSISSYESNN KTIAAVPTVI EQSGRGERAF DIYSRLLRER IIFLGTGIND 
QVSDSLVAQL LFLEAEDPEK DIQIYINSPG GSVTAGMAIY DTMQQISPDV VTICFGVAAS
MGAFLLSGGA KGKRLALPNS RIMIHQPLGG AQGQAVEIEI QAKEILFLKK TLNSLLAEHT
GQPLEKINED TERDYFLSPS EAVEYGLIDK VIKK