Gene P9301_17641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9301_17641 
SymbolrecF 
ID4911809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9301 
KingdomBacteria 
Replicon accessionNC_009091 
Strand
Start bp1485558 
End bp1486355 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content30% 
IMG OID640161364 
Productputative DNA repair and genetic recombination protein RecF 
Protein accessionYP_001091988 
Protein GI126697102 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.674364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAAAC AAAGTGAAAT AAAGAACTAT ATCCGAAGTG TATGTTTCTG TTCTAATGAT 
ATAGATATCG TTAGAAGTGA GCCCAGTTAT CGAAGAACGT GGATTGATAA AGTCGTATCT
CAGCTTGAAC CAGTATATTT AGACCTGATA AGTAGATTTA ACAGGCTTTT AAAACAAAGA
AGTCATTTTT GGCGTTCAGA AAGTTTCTTA AAAACCCAAT CCACAGATAT TGTTGAAAGC
TTTGATATTC AAATGTCAAT AATTAGTACA AGAATTTTTA GGCGTAGAAG AAGAGCTTTA
TTAAAAATAA AACCATATGT TGAATATTGG CATAATCATC TAAGCAAATC TCAAGAGCAA
ATAGACATAA ATTATCTTTC GGGGATACAA AATATAAGTC CAGAAGAAGA AGAAGAAGAA
GTTATTAGTA AAAAAATAGC AGATCAACTC TTAAATCAGC GTTCAATAGA AGCATTGACT
GGTAAATGTA ATTTTGGACC ACATCGTGAT GATATTGAGT TTCTAATCAA TAATGTTTCA
GTTAGAAAAT ATGGTTCCTC AGGACAGCAA AGGACTTTTA TCTTGGCTTT AAAGATGGCT
GAACTCGATT TATTGAATAA AACATTAAAT ATTCCTCCAA TACTGATATT GGACGATGTC
TTAGCTGAAT TAGATTTAAC TAGGCAAAAT TTGTTATTAA ATTCTGTTGG TAAAGATAGT
CAATGTTTTA TAAGTGCGAC ACATTTAGAT AAATTCAATC AGTCTTTCAT AGGCTCTTCA
CAAATGATTC ATTTATAA
 
Protein sequence
MKKQSEIKNY IRSVCFCSND IDIVRSEPSY RRTWIDKVVS QLEPVYLDLI SRFNRLLKQR 
SHFWRSESFL KTQSTDIVES FDIQMSIIST RIFRRRRRAL LKIKPYVEYW HNHLSKSQEQ
IDINYLSGIQ NISPEEEEEE VISKKIADQL LNQRSIEALT GKCNFGPHRD DIEFLINNVS
VRKYGSSGQQ RTFILALKMA ELDLLNKTLN IPPILILDDV LAELDLTRQN LLLNSVGKDS
QCFISATHLD KFNQSFIGSS QMIHL