Gene P9301_17631 details

Gene Information

• Locus tag: P9301_17631
• Symbol: speD
• ID: 4911808
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9301
• Kingdom: Bacteria
• Replicon accession: NC_009091
• Strand: -
• Start bp: 1485071
• End bp: 1485505
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 640161363
• Product: S-adenosylmethionine decarboxylase proenzyme
• Protein accession: YP_001091987
• Protein GI: 126697101
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1586] S-adenosylmethionine decarboxylase
• TIGRFAM ID: [TIGR03330] S-adenosylmethionine decarboxylase proenzyme, Bacillus form

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAATCT ACAAAAAAAG TCAAATTTTA AGTTCGTTAA GTAATGAGCA AAAATTAAGT 
CATCAAAGTA AACACCTTTT GTTGGAACTT TATAGATGCG ATCGCGAAAA ATTAAATGAT 
GAATCCTTTT TACGATGTAT TTTAAATAGA GCTGCTAAAT TGGCAAATGC AACCATTTTG 
AATTTGATTA GTAATAAATT TGAGCCTCAT GGGGTTACTG CAATTGCATT ACTGGCAGAA 
TCTCATATTT CAATACATAC TTGGCCTGAA TCTAATTATT CGGCAGTCGA TATTTTTACA 
TGTGGTAAAA ATATGATGCC TGAACTGGCT AGTCAATATT TAATTGAATC TTTGATGGCT 
AAAGAACATT CTTTGCGTGT CATTGAGCGA AATCCACCTT CAGCAGTCTC TAAACAGATC 
AGAACAGTTG TTTGA 

 

Protein sequence

MEIYKKSQIL SSLSNEQKLS HQSKHLLLEL YRCDREKLND ESFLRCILNR AAKLANATIL 
NLISNKFEPH GVTAIALLAE SHISIHTWPE SNYSAVDIFT CGKNMMPELA SQYLIESLMA 
KEHSLRVIER NPPSAVSKQI RTVV