Gene P9301_17491 details

Gene Information

• Locus tag: P9301_17491
• Symbol: rplC
• ID: 4912111
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9301
• Kingdom: Bacteria
• Replicon accession: NC_009091
• Strand: -
• Start bp: 1471509
• End bp: 1472162
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 640161348
• Product: 50S ribosomal protein L3
• Protein accession: YP_001091973
• Protein GI: 126697087
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTATAG GAATTTTAGG AAAGAAATTG GGCATGTCCC AACTTTTCGA CGAAAAAGGT 
AATTCGGTGC CAGTTACTCT TATTGAGGCT GGTCCTTGCC GTATCACTCA ATTGAAAACA 
ACCGCTTTGG ATGGTTATAC TGCCGTTCAA ATAGGTTATG GCTTGTCCAA AGATAAGCAC 
ATAAGTAAGC CTGAAAAGGG ACATTTGTTG AAATCAGGTG AAGAACTTTT AAAGCATTTG 
AAAGAATATA GGGTTGAAGA AACTTCATCT TATGAAATCG GAAATCAAAT AACTGTAAAA 
AACTTTGAGG TTGGTCAAAA AGTTGATATC AGTGGTAAAT CTATGGGTAG AGGTTTTGCT 
GGTTACCAGA AAAGACATGG TTTTAGCAGA GGTCCAATGA GTCATGGTTC AAAAAATCAT 
AGAGCACCTG GATCTACAGG TGCAGGAACA ACTCCAGGCA GAATTTATCC TGGAAAAAGA 
ATGGCAGGAA GATATGGAGG AAAACAAATT ACTACTAAAG GTTTGTTAGT TCTAAAAATT 
GATGATCAGA AAAATTTGCT TGTAGTAAAG GGTTCTGTCC CAGGTAAACC AGGCTCAATA 
ATAAATATTA AGCCAAATAA TATTGTAGGC AAAAAAGGAG GTGAAAAATC ATGA 

 

Protein sequence

MSIGILGKKL GMSQLFDEKG NSVPVTLIEA GPCRITQLKT TALDGYTAVQ IGYGLSKDKH 
ISKPEKGHLL KSGEELLKHL KEYRVEETSS YEIGNQITVK NFEVGQKVDI SGKSMGRGFA 
GYQKRHGFSR GPMSHGSKNH RAPGSTGAGT TPGRIYPGKR MAGRYGGKQI TTKGLLVLKI 
DDQKNLLVVK GSVPGKPGSI INIKPNNIVG KKGGEKS