| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_17431 |
|---|
| Symbol | rpsC |
|---|
| ID | 4912105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9301 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009091 |
|---|
| Strand | - |
|---|
| Start bp | 1468275 |
|---|
| End bp | 1469006 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640161342 |
|---|
| Product | 30S ribosomal protein S3 |
|---|
| Protein accession | YP_001091967 |
|---|
| Protein GI | 126697081 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0092] Ribosomal protein S3 |
|---|
| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGACACA AAATACATCC TTCTGGACTG AGATTAGGCA TTACACAAGA GCATCGCTCT
AAGTGGTTTG CTACTTCTAA AACATATCCA ATTCTTCTCC AAGAAGATTT TAAAATTCGT
ACTTTCATAC AAAAAAAATA TGGTGCAGCA GGAATTAGCG ATGTTTTAAT AGCTAGAAAA
GCTGACCAAC TGGAACTTGA ATTAAAAACA GCAAGACCAG GAGTTATAGT TGGAAGACAA
GGAAGTGGTA TTGAAGAATT AAGATCTGGC ATTCAAAAAA CTATAGGAGA TAGGACTAGG
CAAGTCAGAA TTAATGTTGT TGAAGTTGAA CGCGTAGATG CAGATGCTTT TTTACTAGCA
GAATATATTG CGCAACAACT AGAAAAAAGA GTCGCTTTTA GAAGAACTAT AAGGATGGCC
TTACAACGGG CTCAAAGGGC TGGAGTCTTA GGCCTCAAAA TTCAAGTAGG TGGAAGGTTA
AATGGTGCTG AAATAGCTAG AACAGAATGG ACGAGAGAAG GTAGAGTACC CTTACATACT
TTGAGAGCTG AAATTGATTA TGCAACACGT GAAGCTAATA CAACTTACGG AGTTCTAGGC
ATTAAAGTTT GGGTTTTCAA AGGTGAAGTT CTTCCTAAAG AAGAACAAAC TATACCTGTG
GGTGCGAGCC CTAAGAGGAA AGCAAGTAGA AGACCTCAGC AATTTGAGGA TCGTTCAAAT
GAGAATTCAT AG
|
|---|
| Protein sequence | MGHKIHPSGL RLGITQEHRS KWFATSKTYP ILLQEDFKIR TFIQKKYGAA GISDVLIARK
ADQLELELKT ARPGVIVGRQ GSGIEELRSG IQKTIGDRTR QVRINVVEVE RVDADAFLLA
EYIAQQLEKR VAFRRTIRMA LQRAQRAGVL GLKIQVGGRL NGAEIARTEW TREGRVPLHT
LRAEIDYATR EANTTYGVLG IKVWVFKGEV LPKEEQTIPV GASPKRKASR RPQQFEDRSN
ENS
|
|---|
| |