Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_17371 |
Symbol | rplE |
ID | 4912139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | - |
Start bp | 1465956 |
End bp | 1466495 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640161336 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_001091961 |
Protein GI | 126697075 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCTAA AAAATCGCTA CAAAGAATCA ATTAGACCAA AACTTTTAAA AGACCTTGGT CTTAAAAATA TTCATCAAGT ACCTAAAGTT GTCAAAGTCA ACGTTAACAG AGGTCTTGGT GAGGCAGCTT CAAATTCAAA AGCTTTAGAG GCTTCCTTGA ATGAAATGGC AACAATTACA GGGCAAAAGG CACTAGTAAC TAGGGCCAAA AAAGCTATCG CGGGTTTTAA AATTCGTGAG GGTATGCCAA TTGGTTGTAC TGTAACTTTG AGAGGTGACA GGATGTATTC CTTTTTAGAG AGATTTATAA ATCTAGCTTT ACCAAGAATA AGAGACTTTA GAGGAGTTAA TCCAAAAAGT TTTGATGGGA GGGGGAATTA CACCGTTGGA GTGAAAGAGC AATTAATTTT TCCTGAAATC TCTTTTGATA AAATAGATTC AATAAGAGGT ATGGATATAA CTATTGTCAC TAGTGCGAGA TCAGATCAAG AGGGTAAAGC TCTCTTGCAA GAGTTAGGAA TGCCTTTTAG TAAGAATTAA
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Protein sequence | MTLKNRYKES IRPKLLKDLG LKNIHQVPKV VKVNVNRGLG EAASNSKALE ASLNEMATIT GQKALVTRAK KAIAGFKIRE GMPIGCTVTL RGDRMYSFLE RFINLALPRI RDFRGVNPKS FDGRGNYTVG VKEQLIFPEI SFDKIDSIRG MDITIVTSAR SDQEGKALLQ ELGMPFSKN
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