Gene P9301_17371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9301_17371 
SymbolrplE 
ID4912139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9301 
KingdomBacteria 
Replicon accessionNC_009091 
Strand
Start bp1465956 
End bp1466495 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content36% 
IMG OID640161336 
Product50S ribosomal protein L5 
Protein accessionYP_001091961 
Protein GI126697075 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0094] Ribosomal protein L5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCTAA AAAATCGCTA CAAAGAATCA ATTAGACCAA AACTTTTAAA AGACCTTGGT 
CTTAAAAATA TTCATCAAGT ACCTAAAGTT GTCAAAGTCA ACGTTAACAG AGGTCTTGGT
GAGGCAGCTT CAAATTCAAA AGCTTTAGAG GCTTCCTTGA ATGAAATGGC AACAATTACA
GGGCAAAAGG CACTAGTAAC TAGGGCCAAA AAAGCTATCG CGGGTTTTAA AATTCGTGAG
GGTATGCCAA TTGGTTGTAC TGTAACTTTG AGAGGTGACA GGATGTATTC CTTTTTAGAG
AGATTTATAA ATCTAGCTTT ACCAAGAATA AGAGACTTTA GAGGAGTTAA TCCAAAAAGT
TTTGATGGGA GGGGGAATTA CACCGTTGGA GTGAAAGAGC AATTAATTTT TCCTGAAATC
TCTTTTGATA AAATAGATTC AATAAGAGGT ATGGATATAA CTATTGTCAC TAGTGCGAGA
TCAGATCAAG AGGGTAAAGC TCTCTTGCAA GAGTTAGGAA TGCCTTTTAG TAAGAATTAA
 
Protein sequence
MTLKNRYKES IRPKLLKDLG LKNIHQVPKV VKVNVNRGLG EAASNSKALE ASLNEMATIT 
GQKALVTRAK KAIAGFKIRE GMPIGCTVTL RGDRMYSFLE RFINLALPRI RDFRGVNPKS
FDGRGNYTVG VKEQLIFPEI SFDKIDSIRG MDITIVTSAR SDQEGKALLQ ELGMPFSKN