Gene P9301_17351 details

Gene Information

• Locus tag: P9301_17351
• Symbol: rplF
• ID: 4912137
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9301
• Kingdom: Bacteria
• Replicon accession: NC_009091
• Strand: -
• Start bp: 1464993
• End bp: 1465532
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 640161334
• Product: 50S ribosomal protein L6
• Protein accession: YP_001091959
• Protein GI: 126697073
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAGAA TTGGAAAAAC ACCAGTACTG ATACCAGACA AAGTATCTGT TGATTTTGAT 
GGATTAACAG TTACAGTTAA AGGTCCTAAG GGTGAGTTAA AACGTCAGAT GCCAGAAGGA 
GTTAGTTTTG ATAAAAAAGA TAATACTGTT ATCGTAAGTC CCACTACTAC CAAAATTTTC 
TCAAGGCAAA GACATGGTTT ATGTAGAGCT TTAATAGCAA ATATGGTTAA AGGGGTTAGT 
CAAGGTTTTT CAAAAAAACT TGAAATTGTA GGCGTTGGAT CGAGAGCACA AGTAAAAGGT 
AAAAATCTAG TTGTTAGTGC AGGATATAGT CATCCTATAG AAATGATCCC CCCTGATGGT 
ATAACATACA AGGTTGAGAG TAATACAAAC GTTACTGTAT CTGGAATTGA TAAGGAAATT 
GTTGGTAATG AAGCAGCAAA AATCAGATCA ATTAGACCTC CAGAACCATA TAAAGGAAAA 
GGAATTAAAT ATCATGATGA GAGAATTCTC AGAAAAGCTG GTAAATCTGG CAAAAAATAA 

 

Protein sequence

MSRIGKTPVL IPDKVSVDFD GLTVTVKGPK GELKRQMPEG VSFDKKDNTV IVSPTTTKIF 
SRQRHGLCRA LIANMVKGVS QGFSKKLEIV GVGSRAQVKG KNLVVSAGYS HPIEMIPPDG 
ITYKVESNTN VTVSGIDKEI VGNEAAKIRS IRPPEPYKGK GIKYHDERIL RKAGKSGKK