| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_17271 |
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| Symbol | rpoA |
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| ID | 4912388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9301 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009091 |
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| Strand | - |
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| Start bp | 1459618 |
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| End bp | 1460556 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640161326 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_001091951 |
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| Protein GI | 126697065 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTGCAAT ACCAGATTGA AAGAATCGAC CATCAAATAG CAGATGATCG CTCCCAAACA
GGAACTTTTT TAATTGGCCC TCTAGAAAGG GGACAAGCTA CAACTTTGGG TAATTCTCTT
AGAAGAGTCC TTATGGGAGG ACTTGAAGGG AGTGCAGTTA CTGCAGTAAG AATAGCAGGA
ATTAATCATG AATATGCCAC TATTCCTGGA GTTAGAGAAG ACGTTTTAGA TATTCTTCTT
AATTGCAAGC AACTATCAAT AAATAGCACT AATCCAGAGC TCGAAATCGG CAGGTTAGTA
GCTAGTGGTC CAATGGAGGT GAAGGCTAAT GACATTCAAT TCTCCTCTCA AGTTGAAATT
GTTGACGGCG AAAAACCGAT TGCGACTATT CAGGAGGGTC ATAACTTAGA GTTGGAAATC
CATGTTGAAA GAGGCGTTGG ATATAGACCC GTCGACCGAA AGAGTGAAGA GACAACTGCC
ATTGATTTGC TTCAAATAGA TGCTGTATTT ATGCCGGTGA AGAGAGTGAA CTTTACGATT
GATGAAACTG CTGTAGCAGA AGGCGGAACG GGAAGAGAAA GATTAAAAAT GGAAGTAGTA
ACAGATGGCT CAACCAGTCC TGACGATGCT ATTGCTGAAG CTGCAAACCA ATTAATAGAA
CTCTTCCAAC CCCTCGCTAC TGTAACAATG GTTGAAGAAA TCCCTGAAGA ACCTGAACCA
TCTCCTGAAG CTCAAATTCC TCTCGAGGAA CTAAACTTGT CCGTTAGAGC ATATAATTGT
TTGAAACGGG CGCAAGTTAA CTCAGTTTCA GATTTAATGG GCTTTAGCTA TGAAGATCTT
CTTGAAATTA AGAACTTTGG CTCTAAATCT GCAGATGAGG TGATTGAAGC TCTTGAGCGC
ATTGGCATTT CTATTCCACA AAGCAGAACA TCTGTTTAA
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| Protein sequence | MLQYQIERID HQIADDRSQT GTFLIGPLER GQATTLGNSL RRVLMGGLEG SAVTAVRIAG
INHEYATIPG VREDVLDILL NCKQLSINST NPELEIGRLV ASGPMEVKAN DIQFSSQVEI
VDGEKPIATI QEGHNLELEI HVERGVGYRP VDRKSEETTA IDLLQIDAVF MPVKRVNFTI
DETAVAEGGT GRERLKMEVV TDGSTSPDDA IAEAANQLIE LFQPLATVTM VEEIPEEPEP
SPEAQIPLEE LNLSVRAYNC LKRAQVNSVS DLMGFSYEDL LEIKNFGSKS ADEVIEALER
IGISIPQSRT SV
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