Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_17151 |
Symbol | psaB |
ID | 4912401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | - |
Start bp | 1446493 |
End bp | 1448721 |
Gene Length | 2229 bp |
Protein Length | 742 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640161313 |
Product | photosystem I P700 chlorophyll a apoprotein A2 |
Protein accession | YP_001091939 |
Protein GI | 126697053 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01336] photosystem I core protein PsaB |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACAA AATTTCCATC ATTTAACCAG GGTCTAGCTC AGGACCCTAC AACCAGACGA ATATGGTACG GAATAGCTAC CGCTCACGAC TTTGAAAGTC ATGATGGTAT GACCGAAGAA AAGCTTTATC AGAAACTTTT CTCTACTCAT TTTGGTCATT TAGCAATAAT AGCGCTTTGG GTAGCTGGTA ACTTGTTTCA TATTGCTTGG CAAGGTAACT TCGAGCAATT TGTACTTGAT CCAACCCACG TTCGTCCTAT TGCTCATGCT ATTTGGGATC CACATTTTGG ATCTGGCATA ACAGAGGCAA TGACACAAGC TGGAGCTAGT GGTCCAGTAA ACATAGCTTA CTCAGGTCTC TACCATTGGT GGTACACAAT TGGAATGAGA ACCAATGAGC AACTCTTCCA AGCTTCAATA TTTATGAGTA TTTTGGCTTG TTGGACTCTA TTTGCAGGTT GGCTACACTT ACAGCCTAAA TTCAGACCTT CTTTAGCTTG GTTTAAAAAT GCAGAGTCAA GATTAAATCA TCATTTAGCT GTCTTATTTG GTTTTAGTAG TATTGCTTGG ACAGGACATT TAGTTCATGT TGCTATACCT GAATCAAGAG GTCAACATGT AGGTTGGGAT AACTGGTTAA CAGTGCTTCC ACACCCTGCA GGACTAGCTC CTTTCTTTAC TTTAAACTGG GGAGCATATG CTCAAAATCC TGATTCTCTA GATCAAGTTT TTGGAACAGC TGAGGGAGCT GGTACAGCAA TCTTTACTTT CTTAGGTGGT CTTCACCCTC AAAGTGAAGC ATTATGGCTT ACTGACATTG CACATCATCA TATTGCGATT GGAACAGTTT TTGTAATTGC AGGTCATATG TATAGAAATA CTTTTGGTAT TGGTCATAGC CTTAAAGAAA TTACAGAAGC TCATAATACA AGACACCCTA ATGATCCTCA TAAAGGTAGT TTCGGAATTA ACCACGATGG AATATATGAA ACTGTCAATA ACTCATTACA TTTCCAACTT GGATTAGCAT TAGCATCACT TGGTGTAGCA ACTTCTCTTG TAGCCCAACA TATGGGTGCA CTTCCCTCTT ATGCTTTTAT TGCCAGGGAC TACACCACAC AATCTGCTTT ATATAGTCAT CATCAGTACA TAGCAATGTT CTTGATGGTT GGTGCATTTG CTCATGGAGC CATTTTCTTT GTAAGAGATT ATGATCCTGA ACTAAATAAA GATAATGTTT TAGCAAGAGT ACTTGGAACA AAGGAAGCTT TGATAAGTCA TCTTAGTTGG GTAACAATGT TGCTTGGATT TCATACTCTT GGAATTTATG TTCACAACGA TGTCGTTGTA GCTTTTGGTA ATCCTGAAAA GCAAATTCTA ATAGAGCCAG TATTTGCTCA ATTCGTTCAA GCTGCTCAAG GTAAGATGAT GTACGGCTTT AACGCTTTAT TATCTGATCC TACAAGTTCA GCATCTCTAG CAGCTAATTC ACTACCAGGT AATCATTACT GGATGGATCT TATCAATAGA CAAGATGCAT TAAGTGCTTT CCTACCCATC GGACCTGCAG ATTTCCTAGT TCACCATGCT ATCGCTTTAG GTCTTCATAC AACTGCATTA ATCCTTATCA AAGGTGCACT TGATGCTAGA GGTACAAAAT TAATTCCTGA TAAGAAAGAT TTAGGTTATG CATTCCCTTG CGATGGACCT GGGCGCGGAG GTACTTGTGA TAGTTCATCT TGGGACGCTA TGTACTTAGC TATGTTCTGG GCATTAAATT TACTAGCATG GGTAACTTTC TACTGGCATT GGAAACACCT AGCAATTTGG CAGGGTAACG TAGCACAATT TAACGAATCA GGAACTTATC TAATGGGTTG GTTCAGAGAT TATCTCTGGT TAAACTCTGC TCAACTTATT AATGGATATA ATCCATTTGG AGTAAATTCT TTATCTCCTT GGGCTTGGAT GTTCTTATTT GGTCACTTAG TTTGGGCTAC TGGTTTCATG TTCCTAATTT CATGGCGTGG TTACTGGCAA GAGTTAATTG AAACATTAGT TTGGGCACAT CAGCGTACTC CAATTGCTAA CCTTGTTGGC TGGAGAGATA AACCTGTTGC ACTTTCAATT GTTCAAGCTA GATTAGTTGG ACTAGCACAT TTCACGATTG GAAACATTCT TACATTCGGT GCATTTGTTA TCGCATCAAC TTCAGGTAAG TTTGGTTAA
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Protein sequence | MATKFPSFNQ GLAQDPTTRR IWYGIATAHD FESHDGMTEE KLYQKLFSTH FGHLAIIALW VAGNLFHIAW QGNFEQFVLD PTHVRPIAHA IWDPHFGSGI TEAMTQAGAS GPVNIAYSGL YHWWYTIGMR TNEQLFQASI FMSILACWTL FAGWLHLQPK FRPSLAWFKN AESRLNHHLA VLFGFSSIAW TGHLVHVAIP ESRGQHVGWD NWLTVLPHPA GLAPFFTLNW GAYAQNPDSL DQVFGTAEGA GTAIFTFLGG LHPQSEALWL TDIAHHHIAI GTVFVIAGHM YRNTFGIGHS LKEITEAHNT RHPNDPHKGS FGINHDGIYE TVNNSLHFQL GLALASLGVA TSLVAQHMGA LPSYAFIARD YTTQSALYSH HQYIAMFLMV GAFAHGAIFF VRDYDPELNK DNVLARVLGT KEALISHLSW VTMLLGFHTL GIYVHNDVVV AFGNPEKQIL IEPVFAQFVQ AAQGKMMYGF NALLSDPTSS ASLAANSLPG NHYWMDLINR QDALSAFLPI GPADFLVHHA IALGLHTTAL ILIKGALDAR GTKLIPDKKD LGYAFPCDGP GRGGTCDSSS WDAMYLAMFW ALNLLAWVTF YWHWKHLAIW QGNVAQFNES GTYLMGWFRD YLWLNSAQLI NGYNPFGVNS LSPWAWMFLF GHLVWATGFM FLISWRGYWQ ELIETLVWAH QRTPIANLVG WRDKPVALSI VQARLVGLAH FTIGNILTFG AFVIASTSGK FG
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