| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_16911 |
|---|
| Symbol | |
|---|
| ID | 4911857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9301 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009091 |
|---|
| Strand | - |
|---|
| Start bp | 1423677 |
|---|
| End bp | 1424903 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640161289 |
|---|
| Product | L,L-diaminopimelate aminotransferase |
|---|
| Protein accession | YP_001091915 |
|---|
| Protein GI | 126697029 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | [TIGR03542] LL-diaminopimelate aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTTCAAG TAAACGAAAA TTATTTAAAA CTCAAAGCAG GCTATTTATT TCCTGAAATT
GCTAAAAGGG TTAAAGCATA TTCTCAATCA AATAAGAGTG CAGATATTAT TAAGCTTGGC
ATTGGAGACG TTACAGAACC ATTGCCTAGA GCATGCATAG AGGCTATGGG TAAAGCTTTA
GATGAAATGG GAACAACAGA TGGTTTCAAA GGTTATGGAC CAGAACAAGG TTATTCATGG
CTGAGAGAAA AAATATCTGA GCATGATTTT ATTTCGAGAG GCTGTCAAAT TTCATCTGAA
GAAATCTTTG TTTCTGATGG TTCTAAATGC GATAGTAGCA ATATTTTAGA TATTCTTGGT
AAAGATAATT CAATTGCTGT AACTGATCCT GTTTACCCAG TTTATGTAGA TAGTAATGTT
ATGACAGGCA GAACTGGTGA TTCTCTTGAA AATGGTACTT ATAAAGGATT GACATATCTT
GCAATAAACG AGGATAATAA CTTTCTGCCA GAACTGCCTG AAAAAAAAGT TGATATTTTA
TATCTTTGTT TTCCTAATAA TCCTACTGGA GCAACGATTA ATAAAGCAGA CTTGAAAAAG
TGGGTTGACT ATGCGCTTCA AAACAAATCT CTAATACTTT TTGATGCAGC TTATGAAGCA
TTTATTCAAG ATGATAATAT TCCACATTCA ATATATGAGA TTGAGGGAGC AAAGGATTGT
GCTATTGAAT TTAGATCTTT TTCAAAAAAT GCAGGATTCA CTGGAGTCAG ATGTGCTTTT
ACAGTAATAC CTAAAAATCT CAAAGGTTTG AGCTCCACAA ATGAGGAAAT AGACTTATGG
CCTCTTTGGA ATAGGCGACA GTCGACAAAG TTCAATGGAG TAAGTTATGT GGTCCAGAGA
GGAGCAGAGG CTGTTTATTC TCTTGAAGGC AAGAAACAGG TAAAAGGTTT GATTGATTTT
TATATGGAAA ATGCAAAAAT TATGAAAAAT AAACTTCAAA ATGCAGGATA TAAAGTGTAT
GGAGGAGACA ATGCACCTTA TATCTGGATT AAAGTTCCTG ATCAAATGTC ATCTTGGGAC
TTTTTTGATT TCCTTCTTCA AAAAGTTGGT GTAGTGGGAA CTCCTGGGAG CGGATTTGGA
TTGGCAGGAG AGGGGTATTT TCGTTTGTCA GCATTTAACT CAAGATCAAA CGTCCTTGAT
GCAATGGAAA GAATAATTAA TATATAA
|
|---|
| Protein sequence | MVQVNENYLK LKAGYLFPEI AKRVKAYSQS NKSADIIKLG IGDVTEPLPR ACIEAMGKAL
DEMGTTDGFK GYGPEQGYSW LREKISEHDF ISRGCQISSE EIFVSDGSKC DSSNILDILG
KDNSIAVTDP VYPVYVDSNV MTGRTGDSLE NGTYKGLTYL AINEDNNFLP ELPEKKVDIL
YLCFPNNPTG ATINKADLKK WVDYALQNKS LILFDAAYEA FIQDDNIPHS IYEIEGAKDC
AIEFRSFSKN AGFTGVRCAF TVIPKNLKGL SSTNEEIDLW PLWNRRQSTK FNGVSYVVQR
GAEAVYSLEG KKQVKGLIDF YMENAKIMKN KLQNAGYKVY GGDNAPYIWI KVPDQMSSWD
FFDFLLQKVG VVGTPGSGFG LAGEGYFRLS AFNSRSNVLD AMERIINI
|
|---|
| |