Gene P9301_16491 details

Gene Information

• Locus tag: P9301_16491
• Symbol: ccdA
• ID: 4911146
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9301
• Kingdom: Bacteria
• Replicon accession: NC_009091
• Strand: +
• Start bp: 1379361
• End bp: 1380017
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 640161246
• Product: putative c-type cytochrome biogenesis protein CcdA
• Protein accession: YP_001091873
• Protein GI: 126696987
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0785] Cytochrome c biogenesis protein

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGAATG GTCTTAATAA TCCTGGCCCA TTTACTATAT TTCTGATCTT CAGCGCAGGA 
CTTTTAACGA GTCTGGGACC TTGTTCATTA TCATTACTTC CAGTCACAAT TGCTTATATA 
GGAGGAACAG AGAAAAATAA ATTTAAACTT ATTAGTTTTT CAGGAGGAGT TGTTTTTTCA 
CTTGTTGCTC TGGGTTCTGC TAGTGGATTC TTAGGGAAGA TATATGGACA AATTCCATCC 
TATTACACTT CGATTGTTGC CTTGATAGCA ATAATAATGG GTTTAAATTT ACTAGGAATT 
GTAAAATTTA AGTTTCCGAA TGGGCCTGAT TTTAAAATAA TTGAAGATAA AATTCCATCC 
TTTCTGGCGC CATTTGCTAT TGGAACTAGT TTTGGACTGG CCTCTTCACC TTGCATTACT 
CCAGTTTTAG CAACTCTTCT GGTATGGGTA TCGCAAGCTA AAAACCCAAC AATCTCTATT 
ATTTTTTTAT TTTTCTTTGG AATAGGCCAA GTAACTCCAC TAATCGTTGC GGGAGCCACT 
GCAGAAAACT TAAAAAAATT TTTAGAGCTT AGAAAATTTA GTCAAATAAT TCCTACTCTT 
AGTGGGATAT TTTTAGTTTC CCTAGGATTA TTAAATTTAT TTTCAAATTG GATTTAG 

 

Protein sequence

MQNGLNNPGP FTIFLIFSAG LLTSLGPCSL SLLPVTIAYI GGTEKNKFKL ISFSGGVVFS 
LVALGSASGF LGKIYGQIPS YYTSIVALIA IIMGLNLLGI VKFKFPNGPD FKIIEDKIPS 
FLAPFAIGTS FGLASSPCIT PVLATLLVWV SQAKNPTISI IFLFFFGIGQ VTPLIVAGAT 
AENLKKFLEL RKFSQIIPTL SGIFLVSLGL LNLFSNWI