| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_16411 |
|---|
| Symbol | atpA |
|---|
| ID | 4911138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9301 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009091 |
|---|
| Strand | - |
|---|
| Start bp | 1373011 |
|---|
| End bp | 1374528 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640161238 |
|---|
| Product | F0F1 ATP synthase subunit alpha |
|---|
| Protein accession | YP_001091865 |
|---|
| Protein GI | 126696979 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTATCTA TACGCCCTGA TGAAATCAGT TCAATCTTAA AACAACAAAT AACTGATTAT
GACCAATCTG TAAGTGTTAG CAATGTAGGA ACTGTTCTGC AAATCGGTGA TGGCATTGCA
AGAATATATG GCTTAGATCA GGTCATGGCA GGTGAGCTAT TGGAATTTGA AGATGGTACC
GAAGGTATAG CTTTAAATCT TGAAGATGAT AATGTTGGGG CCGTTTTGAT GGGAGAGGCA
CTTGGTGTCC AAGAAGGGAG TAACGTTAAG TCCACAGGTA AAATTGCATC TGTTCCCGTT
GGTGAAGCAA TGCAGGGGAG AGTTGTTAAC CCTCTCGGAC AACCAATAGA TGGGAAAGGG
GAAATTCCAA CAAGTGATAC TAGATTGATT GAAGAAATGG CTCCTGGAAT AATCAAGAGA
AGATCAGTGC ATGAGCCAAT GCAAACAGGT ATTACATCTA TTGATGCAAT GATTCCTGTT
GGAAGAGGTC AAAGAGAATT AATTATTGGT GATAGACAAA CTGGAAAGTC GGCAATTGCT
ATCGATACGA TAATTAACCA AAAAGGTCAA GACGTAGTAT GTGTTTACGT AGCTATTGGT
CAGAAGTCAG CATCAGTAGC AAATATAGTA GAGGTATTAA GAGAGAGGGG AGCCCTAGAT
TATACAGTAG TTGTTAGTGC AGGAGCTTCA GAACCAGCTG CTTTACAGTA CTTAGCACCT
TATACCGGTG CAGCAATTGC TGAACATTTT ATGTATCAGG GTAAAGCAAC ACTTGTTATT
TATGATGATC TAACGAAACA AGCTCAGGCT TATAGACAAA TGTCTCTCCT TTTAAAAAGA
CCACCAGGAA GAGAGGCTTA TCCAGGAGAT GTTTTCTACT TACACAGTAG ATTACTAGAA
AGAGCAGCAA AACTTTCTGA TGCTATGGGA GGGGGATCTA TGACAGCTCT TCCAATTATT
GAAACTCAGG CAGGGGACGT TTCTGCTTAC ATTCCAACTA ATGTTATTTC AATTACAGAT
GGACAAATAT TCTTGAGTGC AGATTTATTT AACTCAGGAT TAAGACCAGC TATTAATGTT
GGTATTTCCG TTAGCCGTGT TGGAGGAGCC GCTCAGACAA AAGCAATTAA AAAAATTGCA
GGAACTTTAA AATTAGAACT CGCACAGTTT GATGAACTAG CTGCTTTTTC TCAATTTGCA
TCTGATCTTG ATGAAGCAAC TCAGCAACAA CTTGAACGGG GCAAAAGATT AAGAGAGTTA
TTAAAGCAAC CTCAATTCTC TCCGTTGAAC CTTGCAGAAC AAGTTGCAGT TGTTTATGCA
GGAGTTAAAG GTCTTATTGA TGAGGTTCCT GTTGAAGATG TTACTAAATT TGCAACTGAA
CTTCGCGAAT ACTTAAAGCT AAATAAAGCG GAATTTATAG AAGAGATTCT TAAAGAAAAG
AAATTAAATG ATGGACTAGA AGCGACGCTA AAAGAAGTGA TAAATGAAGT TAAATCATCA
ATGCTTGCCA CAGTTTAA
|
|---|
| Protein sequence | MVSIRPDEIS SILKQQITDY DQSVSVSNVG TVLQIGDGIA RIYGLDQVMA GELLEFEDGT
EGIALNLEDD NVGAVLMGEA LGVQEGSNVK STGKIASVPV GEAMQGRVVN PLGQPIDGKG
EIPTSDTRLI EEMAPGIIKR RSVHEPMQTG ITSIDAMIPV GRGQRELIIG DRQTGKSAIA
IDTIINQKGQ DVVCVYVAIG QKSASVANIV EVLRERGALD YTVVVSAGAS EPAALQYLAP
YTGAAIAEHF MYQGKATLVI YDDLTKQAQA YRQMSLLLKR PPGREAYPGD VFYLHSRLLE
RAAKLSDAMG GGSMTALPII ETQAGDVSAY IPTNVISITD GQIFLSADLF NSGLRPAINV
GISVSRVGGA AQTKAIKKIA GTLKLELAQF DELAAFSQFA SDLDEATQQQ LERGKRLREL
LKQPQFSPLN LAEQVAVVYA GVKGLIDEVP VEDVTKFATE LREYLKLNKA EFIEEILKEK
KLNDGLEATL KEVINEVKSS MLATV
|
|---|
| |