| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_16281 |
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| Symbol | atpD |
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| ID | 4911393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9301 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009091 |
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| Strand | + |
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| Start bp | 1361816 |
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| End bp | 1363276 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640161225 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_001091852 |
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| Protein GI | 126696966 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.210886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAGCAA CTCCATCAAC TTCTTCACAA ACAAAAGGCG TAGTTCGTCA GGTAATTGGC
CCAGTTCTAG ACGTAGAATT TCCTGCTGGA AAATTGCCCA AAATTTTAAA TGCTTTAAGA
ATTGAAGCAA AAAATCCTGC TGGACAAGAT ATAGCGCTCA CTGCAGAGGT CCAACAGCTA
CTAGGCGACC ATAGAGTTAG AGCAGTGGCA ATGAGCGGCA CAGACGGCCT TGTAAGAGGC
ATGGAAGCAA TTGACACAGG AGCACCAATA TCTGTACCTG TTGGAGAAGC AACTTTAGGA
AGAATATTTA ATGTTTTAGG AGAACCAGTA GATGAACAAG GTCCAGTAAA TACAAAAGAT
ACTGCTCCAA TCCATAGAGC TGCTCCAAAA TTAACTGACT TAGAAACTAA GCCAAAAGTT
TTTGAAACTG GGATTAAAGT TATCGACCTT TTAGCACCTT ACAGACAAGG AGGAAAAGTT
GGATTATTCG GAGGTGCTGG TGTTGGGAAA ACAGTTCTTA TTCAAGAATT AATTAATAAT
ATTGCTAAGG AACATGGAGG TGTTTCTGTT TTTGGCGGCG TAGGGGAAAG AACAAGAGAA
GGTAACGATT TATATGAAGA ATTTAAAGAA TCAGGCGTTA TCAATGCAGA TGATTTAACT
CAATCAAAAG TTGCATTATG TTTTGGACAA ATGAATGAAC CACCTGGTGC AAGAATGAGA
GTAGGCTTAT CAGCGCTTAC AATGGCTGAA CATTTTAGAG ATGTAAATAA ACAAGACGTT
CTACTTTTTG TTGATAACAT TTTTAGATTC GTTCAAGCTG GTTCTGAAGT ATCTGCATTA
CTTGGAAGAA TGCCTTCAGC TGTTGGATAC CAACCAACAT TAGGAACTGA CGTTGGTGAA
TTACAAGAAA GAATTACATC TACACTAGAG GGATCAATAA CATCTATTCA GGCTGTATAT
GTTCCTGCTG ATGACTTAAC AGACCCAGCT CCAGCTACAA CCTTTGCCCA TCTAGATGCT
ACCACCGTGC TTGCAAGAGC TCTTGCGGCC AAGGGAATTT ACCCAGCAGT TGATCCATTA
GACTCAACAA GCACTATGCT ACAACCATCA GTTGTGGGAG ATGAGCATTA CAAAACAGCC
AGAGCTGTTC AATCCACTTT ACAAAGATAC AAAGAACTTC AGGATATTAT TGCAATTCTT
GGTCTAGATG AGCTTTCTGA AGAAGATAGA TTAACAGTAG ACAGGGCAAG AAAAATTGAA
AAATTTCTTT CTCAACCTTT CTTTGTAGCA GAAATATTTA CAGGAATGTC TGGTAAATAC
GTAAAATTAG AAGATACCAT TGCTGGTTTC AATATGATTT TGTCAGGCGA ATTGGATGAT
TTACCTGAAC AGGCATTTTA CTTAGTTGGT AATATTGATG AAGTTAAAGC AAAGGCTGAA
AAAATAAAAT CAGAAAAATA A
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| Protein sequence | MVATPSTSSQ TKGVVRQVIG PVLDVEFPAG KLPKILNALR IEAKNPAGQD IALTAEVQQL
LGDHRVRAVA MSGTDGLVRG MEAIDTGAPI SVPVGEATLG RIFNVLGEPV DEQGPVNTKD
TAPIHRAAPK LTDLETKPKV FETGIKVIDL LAPYRQGGKV GLFGGAGVGK TVLIQELINN
IAKEHGGVSV FGGVGERTRE GNDLYEEFKE SGVINADDLT QSKVALCFGQ MNEPPGARMR
VGLSALTMAE HFRDVNKQDV LLFVDNIFRF VQAGSEVSAL LGRMPSAVGY QPTLGTDVGE
LQERITSTLE GSITSIQAVY VPADDLTDPA PATTFAHLDA TTVLARALAA KGIYPAVDPL
DSTSTMLQPS VVGDEHYKTA RAVQSTLQRY KELQDIIAIL GLDELSEEDR LTVDRARKIE
KFLSQPFFVA EIFTGMSGKY VKLEDTIAGF NMILSGELDD LPEQAFYLVG NIDEVKAKAE
KIKSEK
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