| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_15281 |
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| Symbol | kaiC |
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| ID | 4912548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9301 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009091 |
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| Strand | - |
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| Start bp | 1296596 |
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| End bp | 1298125 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640161124 |
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| Product | circadian clock protein KaiC |
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| Protein accession | YP_001091752 |
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| Protein GI | 126696866 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
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| TIGRFAM ID | [TIGR02655] circadian clock protein KaiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.788871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGATA AGAAAATTGG CAAATCAAAT AAAATGCAAG TACAAAAATT ACCAACTGGA
ATAGAGGGCT TTGATGATGT TTGCAGGGGT GGGCTGCCTG TATCTCGAAG TACACTCGTT
AGCGGTACCT CAGGAACTGG TAAAACTGTT TTTTCACTAC AATATTTACA TCATGGAATT
TGTAACTTTG ATGAGCCTGG AATCTTCGTA ACATTTGAAG AATCCCCTTT AGATATTATT
AGAAATGCAG CTAGTTTTGG TTGGGACCTA CAGGAATTAA TTGATCAAAA TAAACTTTTT
ATTTTGGATG CTTCTCCTGA CCCTGATGGT CAGGATGTAG CGGGTAGCTT TGATTTGTCT
GGTCTTATTG AGAGAATTAG TTATGCAATT AGAAAATATA AAGCTAAAAG AGTTGCAATA
GATTCAATAA CTGCAGTCTT TCAACAATAT GATGCTATTT ACGTTGTTAG AAGAGAAATA
TTTAGACTGA TAGCAAGATT AAAAGAAATA GGTGTAACAA CTGTTATGAC TACAGAAAGG
GTTGATGACT ACGGACCAAT TGCTAGATAT GGAGTAGAAG AATTTGTATC TGATAATGTT
GTCTTATTAA GAAATGTTCT TGAGTCAGAA AAGAGGAGAA GAACTCTAGA AGTTTTGAAG
TTAAGAGGAA CTGTACATAT GAAAGGTGAA TATCCATTTA CTATGGGAAC CGATGGAATA
AGTGTGTTTG CACTTGGAGC AATGAGATTA ACTCAGAGAT CCTCAAATAT TAGGATTAGC
TCTGGAGTTA AAGATCTTGA TGATATGTGT GGAGGAGGTT ATTTTCAAGA TTCCATTATT
CTCGCCACTG GAGCTACTGG TACAGGTAAA ACAATGCTTG TATCAAAATT TGTTGAAGAT
GCTTATGATA ATAATGAAAG AGCAATACTT TTTGCATATG AAGAATCTAG GGCTCAATTA
CTAAGGAATG CGACTAGCTG GGGAATAGAC TTTGAAAAAA TGGAAAGTGA TGGATTATTG
AAAATTATTT GTGCATATCC TGAATCAACT GGTTTAGAAG ATCACTTACA AATTATTAAA
ACGCAAATTA ATCAATTTAA ACCAAAAAGA ATGGCAATTG ACTCTCTCTC TGCATTAGCC
AGGGGTGTAA GTTTAAATGC ATTTAGACAG TTTGTAATTG CTGTTACCGG TTATACCAAA
CAAGAAGAGA TAGCAGGCTT TTTTACTAAT ACTGCAGAAG AATTTATGGG GAGCCACTCT
ATAACTGATT CTCATATCTC AACAATTACG GATACGATAT TGTTACTTCA ATATGTAGAA
ATAAAAGGTG AGATGGCACG AGCTTTAAAT GTGTTTAAAA TGCGGGGATC ATGGCATGAT
AAACGAATTA GAGAATTTAT TATTACAAAT AGTGGCCCAG AAATAAAAGA TTCTTTTTCT
AATTTTGAAC AAATATTTAG TGGTGCCCCT CATAGAGTTG TACCTGATCA AAATGTTCAA
AATGTTTTTA AAGGATTAGA TAAAAATTAG
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| Protein sequence | MNDKKIGKSN KMQVQKLPTG IEGFDDVCRG GLPVSRSTLV SGTSGTGKTV FSLQYLHHGI
CNFDEPGIFV TFEESPLDII RNAASFGWDL QELIDQNKLF ILDASPDPDG QDVAGSFDLS
GLIERISYAI RKYKAKRVAI DSITAVFQQY DAIYVVRREI FRLIARLKEI GVTTVMTTER
VDDYGPIARY GVEEFVSDNV VLLRNVLESE KRRRTLEVLK LRGTVHMKGE YPFTMGTDGI
SVFALGAMRL TQRSSNIRIS SGVKDLDDMC GGGYFQDSII LATGATGTGK TMLVSKFVED
AYDNNERAIL FAYEESRAQL LRNATSWGID FEKMESDGLL KIICAYPEST GLEDHLQIIK
TQINQFKPKR MAIDSLSALA RGVSLNAFRQ FVIAVTGYTK QEEIAGFFTN TAEEFMGSHS
ITDSHISTIT DTILLLQYVE IKGEMARALN VFKMRGSWHD KRIREFIITN SGPEIKDSFS
NFEQIFSGAP HRVVPDQNVQ NVFKGLDKN
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