| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_15201 |
|---|
| Symbol | lpxB |
|---|
| ID | 4912578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9301 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009091 |
|---|
| Strand | - |
|---|
| Start bp | 1286813 |
|---|
| End bp | 1287991 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640161116 |
|---|
| Product | lipid-A-disaccharide synthase |
|---|
| Protein accession | YP_001091744 |
|---|
| Protein GI | 126696858 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0763] Lipid A disaccharide synthetase |
|---|
| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA AGATATTTAT AAGTACTGGA GAAGTCTCTG GAGATTTGCA CGGAAGTCTT
TTATCAAAAG CGTTATTAGA TGAAGCCAAA AAAAAATCTA TAGATTTAGA AATTTGCGGA
TTAGGTGGGG AGAGAATGCA GAAAGAAGGT GTAAAAATTC TTCAAGATAC TACTTCAATT
AGTGCAATAG GAATTTGGGA GGCTTTACCT CTGATTCTCC CAACAATAAT AATTCAAAAA
AGATTCTATA AATTACTAAA AAAATATCCC CCAGATTGCT TAATATTGAT TGACTATATG
GGTCCCAATA TAAAAATTGG TACTAAATTA AAAAGATCGA AGACAAAAAT TCCAATTTTT
TACTATATTG CTCCCCAAGA GTGGGCTTGG AGGATTGGGA ATAATACTAC AACAAATCTA
ATAAAATTTT CTGATAAAAT TTTTGCGATT TTTAAGAAAG AAGCAGAATT TTACAAAAAG
AGGGGTGGAA ATGTTTTATG GGTTGGGCAT CCAATGATTG ATTTGACAAA AAAACTTCCT
CTGAAGAAAG ATGCTAGAAC TATTCTCAAC CTTCGCCCAG ATCAAAACAT CATCCTTTTA
ATGCCCGCAT CAAGACCTCA AGAATTGAAG TATATATTAC CTACTTTTAT GAAAACGGCT
AAAAAATTAC AACAAAAATA TCCAAGTTTG GTTGTCTTTA TCCCCTCCTG TCGAAGTACT
TTTGATGAAA TATTCAAAAA AGCCTTAAGA AAATATCAAA TTAAAGGATT TGTGATTTCT
CAAAAAGATA GCACAAAATT AAAGCCTCAC ATTTATTCGC TCACTAAAAT TGCTCTTTGT
AAATCTGGGA CAGTTAATAT GGAATTAGCT TTGTATGGAA TTCCACAGAT CGTTGGTTAC
AGAGTTAGCA GGGTAACTGC TTTTATTGCT AAAAAAATTC TCAATTTCAA GGTAAGATTT
ATTTCCCCAG TAAATTTGTT AGTTAATAAA TTAATAATCC CTGAGTTTGT GCAGAGAGAA
TTTGACGAAA AGAAAATTTT CTCCAAATCT TGTAAGATTC TTGAGAGGAA GTCAGAAAAA
ATAAAAATTA AAAAAGGTTA TGCTTTTTTA AAAAAAGAAT TGGGAGAAAA TGGCGTAGTC
CAAAGAGCTG CTAAAGAGAT TATTAATTCT ATTATTTGA
|
|---|
| Protein sequence | MNKKIFISTG EVSGDLHGSL LSKALLDEAK KKSIDLEICG LGGERMQKEG VKILQDTTSI
SAIGIWEALP LILPTIIIQK RFYKLLKKYP PDCLILIDYM GPNIKIGTKL KRSKTKIPIF
YYIAPQEWAW RIGNNTTTNL IKFSDKIFAI FKKEAEFYKK RGGNVLWVGH PMIDLTKKLP
LKKDARTILN LRPDQNIILL MPASRPQELK YILPTFMKTA KKLQQKYPSL VVFIPSCRST
FDEIFKKALR KYQIKGFVIS QKDSTKLKPH IYSLTKIALC KSGTVNMELA LYGIPQIVGY
RVSRVTAFIA KKILNFKVRF ISPVNLLVNK LIIPEFVQRE FDEKKIFSKS CKILERKSEK
IKIKKGYAFL KKELGENGVV QRAAKEIINS II
|
|---|
| |